| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is sufI [H]
Identifier: 218927866
GI number: 218927866
Start: 734264
End: 735688
Strand: Direct
Name: sufI [H]
Synonym: YPO0673
Alternate gene names: 218927866
Gene position: 734264-735688 (Clockwise)
Preceding gene: 218927865
Following gene: 218927868
Centisome position: 15.78
GC content: 52.42
Gene sequence:
>1425_bases ATGTCACTCAGTCGTCGCCAGTTCATTCAGGCTGCGGGCTTAGCGCTTGGTGCTGGCTCACTGCCATTGAGGGCACAGGC TAGTAGTACTCAGCAACCTCAGTTACCGGTGCCCCCCTTATTAGAATCTCGCCGCGGCCAACCGCTTTTTTTAACCTTGC AGCGCGCGCACTGGGCATTTAGTGGCAATAAGAAAGCCGCAGTGTGGGGAATTAACGGCATGTATCTGGGGCCGACGGTC AGAGTTTTTAATGGTGATGACGTTAAGCTCATCTACAGCAACCGGTTGACTGAGCCGGTATCGATGACGATCAGTGGGTT ACAAGTCCCTGGGACGCTGATGGGCGGAGAGGCCCGGATGATCCGCCCCGGAGAGGATTGGTCACCCGTATTGCCGGTAC GTCAGCCGGCGGCAAACTGCTGGTATCATGCCAATACCCCCAACCGAATGGCTCCCCATGTCTATAACGGGCTAGCGGGG ATGTGGCTGGTGGAAGATGCGGTCAGTAAAGCGATGCCGCTGCCAAGTCACTATGGCGTTGATGATTTCCCTCTTATTAT TCAAGATAAACGGCTGGATAATTTTGGTGTGCCGGAATATAACCCGCCTGCCAAAGGGGGGTTTGTCGGGGACACATTAT TGGTTAACGGGGCGCAAAGCCCATTTGTTGAAGTCTCTCGTGGGTGGGTACGTTTACGTTTATTGAATGCGTCTAACGCC CGCCGCTACACCCTGCAACTCAGTGATGGCCGTCCTCTGTATGTTGTTGCCAGCGATCAGGGTTTTCTACCTGCGCCAGT GGCGGTACAGCAACTTTCTCTTGCACCAGGTGAACGGCGTGAAGTGGTGATTGATATGTCACAGGGCAATGAAGTCTCGA TCACTGCTGGTGAATCCGCCGGTATTATGGATCGCCTGCGTGGGTTATTTGAGCCATCAAGTATTTTGATTTCTACCCTG GTGCTGACATTAAAACCAACGGGGTTATTGCCATTGGTGACGGATAATTTGCCTATGCGTTTATTGGCAGATCAGATTAT TGAAGGCAGTGTGATCCGTTCCCGTGAATTCCAACTGGGGGATAATCTCCCGGGAATTAACGGCGCTATCTGGGATATGA ACCGAGTAGATGTGCAGGCTCAGCAGGGGACATGGGAGCGTTGGATAATACATGCTGATATGCCACAAGCATTTCATATT CAGGGCGTTTCTTTCCTGGTGAAAAGTGTGAATGGTGCGGCGGCAATGGCCGAAGATCGTGGTTGGAAGGATACGGTTTG GGTGGATGGTACGGTTGAATTGTGGGTGTATTTCAATCAGGTTTCATCACCGCAATTCCCGTTCTTGTTCTACAGTCAGA CGCTGGAAATGGCTGATCGTGGCTCGGCGGGGCAGTTAGTGACGGTGGCAGCACCGACGCTTTGA
Upstream 100 bases:
>100_bases TTAAGCGACTCTGGTCGTGAGCGTTTTGCCGTCCTTCAGCGTTATTCGCAGTCAGGCAAAATTTTGCAGTAGGTTTGATT GTGGTTTTCACGGAGAAGAT
Downstream 100 bases:
>100_bases TCACGTTTTGGTGACGTGGTGATCGGTTCGGTTGTTATGGCTTAGCTCAGCTAATCTCCGTAGCTTCAACCGCCAATGGG GCCATAAGCGTGGCCCCATT
Product: repressor protein for FtsI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSLSRRQFIQAAGLALGAGSLPLRAQASSTQQPQLPVPPLLESRRGQPLFLTLQRAHWAFSGNKKAAVWGINGMYLGPTV RVFNGDDVKLIYSNRLTEPVSMTISGLQVPGTLMGGEARMIRPGEDWSPVLPVRQPAANCWYHANTPNRMAPHVYNGLAG MWLVEDAVSKAMPLPSHYGVDDFPLIIQDKRLDNFGVPEYNPPAKGGFVGDTLLVNGAQSPFVEVSRGWVRLRLLNASNA RRYTLQLSDGRPLYVVASDQGFLPAPVAVQQLSLAPGERREVVIDMSQGNEVSITAGESAGIMDRLRGLFEPSSILISTL VLTLKPTGLLPLVTDNLPMRLLADQIIEGSVIRSREFQLGDNLPGINGAIWDMNRVDVQAQQGTWERWIIHADMPQAFHI QGVSFLVKSVNGAAAMAEDRGWKDTVWVDGTVELWVYFNQVSSPQFPFLFYSQTLEMADRGSAGQLVTVAAPTL
Sequences:
>Translated_474_residues MSLSRRQFIQAAGLALGAGSLPLRAQASSTQQPQLPVPPLLESRRGQPLFLTLQRAHWAFSGNKKAAVWGINGMYLGPTV RVFNGDDVKLIYSNRLTEPVSMTISGLQVPGTLMGGEARMIRPGEDWSPVLPVRQPAANCWYHANTPNRMAPHVYNGLAG MWLVEDAVSKAMPLPSHYGVDDFPLIIQDKRLDNFGVPEYNPPAKGGFVGDTLLVNGAQSPFVEVSRGWVRLRLLNASNA RRYTLQLSDGRPLYVVASDQGFLPAPVAVQQLSLAPGERREVVIDMSQGNEVSITAGESAGIMDRLRGLFEPSSILISTL VLTLKPTGLLPLVTDNLPMRLLADQIIEGSVIRSREFQLGDNLPGINGAIWDMNRVDVQAQQGTWERWIIHADMPQAFHI QGVSFLVKSVNGAAAMAEDRGWKDTVWVDGTVELWVYFNQVSSPQFPFLFYSQTLEMADRGSAGQLVTVAAPTL >Mature_473_residues SLSRRQFIQAAGLALGAGSLPLRAQASSTQQPQLPVPPLLESRRGQPLFLTLQRAHWAFSGNKKAAVWGINGMYLGPTVR VFNGDDVKLIYSNRLTEPVSMTISGLQVPGTLMGGEARMIRPGEDWSPVLPVRQPAANCWYHANTPNRMAPHVYNGLAGM WLVEDAVSKAMPLPSHYGVDDFPLIIQDKRLDNFGVPEYNPPAKGGFVGDTLLVNGAQSPFVEVSRGWVRLRLLNASNAR RYTLQLSDGRPLYVVASDQGFLPAPVAVQQLSLAPGERREVVIDMSQGNEVSITAGESAGIMDRLRGLFEPSSILISTLV LTLKPTGLLPLVTDNLPMRLLADQIIEGSVIRSREFQLGDNLPGINGAIWDMNRVDVQAQQGTWERWIIHADMPQAFHIQ GVSFLVKSVNGAAAMAEDRGWKDTVWVDGTVELWVYFNQVSSPQFPFLFYSQTLEMADRGSAGQLVTVAAPTL
Specific function: Involved in cell division, suppresses a ftsI mutation [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 plastocyanin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1789394, Length=472, Percent_Identity=74.1525423728814, Blast_Score=728, Evalue=0.0, Organism=Escherichia coli, GI1786314, Length=513, Percent_Identity=33.9181286549708, Blast_Score=249, Evalue=2e-67,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR008972 - InterPro: IPR006311 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 51891; Mature: 51760
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSRRQFIQAAGLALGAGSLPLRAQASSTQQPQLPVPPLLESRRGQPLFLTLQRAHWAF CCCCHHHHHHHHCEEECCCCCCEEECCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEEEEE SGNKKAAVWGINGMYLGPTVRVFNGDDVKLIYSNRLTEPVSMTISGLQVPGTLMGGEARM CCCCEEEEEECCCEEECCEEEEECCCCEEEEECCCCCCCCEEEEECEECCCEEECCCEEE IRPGEDWSPVLPVRQPAANCWYHANTPNRMAPHVYNGLAGMWLVEDAVSKAMPLPSHYGV ECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCC DDFPLIIQDKRLDNFGVPEYNPPAKGGFVGDTLLVNGAQSPFVEVSRGWVRLRLLNASNA CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCEEEEEEEECCCC RRYTLQLSDGRPLYVVASDQGFLPAPVAVQQLSLAPGERREVVIDMSQGNEVSITAGESA EEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCC GIMDRLRGLFEPSSILISTLVLTLKPTGLLPLVTDNLPMRLLADQIIEGSVIRSREFQLG CHHHHHHHHCCCHHHHHHHHHEEECCCCCEEEEECCCCHHHHHHHHHCCCEEECCCEECC DNLPGINGAIWDMNRVDVQAQQGTWERWIIHADMPQAFHIQGVSFLVKSVNGAAAMAEDR CCCCCCCCEEECCCEEEEEECCCCCEEEEEECCCCCEEEECHHHHHHHHCCCCEEECCCC GWKDTVWVDGTVELWVYFNQVSSPQFPFLFYSQTLEMADRGSAGQLVTVAAPTL CCCCEEEECCEEEEEEEEECCCCCCCCEEEEHHHHHHHCCCCCCCEEEEECCCC >Mature Secondary Structure SLSRRQFIQAAGLALGAGSLPLRAQASSTQQPQLPVPPLLESRRGQPLFLTLQRAHWAF CCCHHHHHHHHCEEECCCCCCEEECCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEEEEE SGNKKAAVWGINGMYLGPTVRVFNGDDVKLIYSNRLTEPVSMTISGLQVPGTLMGGEARM CCCCEEEEEECCCEEECCEEEEECCCCEEEEECCCCCCCCEEEEECEECCCEEECCCEEE IRPGEDWSPVLPVRQPAANCWYHANTPNRMAPHVYNGLAGMWLVEDAVSKAMPLPSHYGV ECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCC DDFPLIIQDKRLDNFGVPEYNPPAKGGFVGDTLLVNGAQSPFVEVSRGWVRLRLLNASNA CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCEEEEEEEECCCC RRYTLQLSDGRPLYVVASDQGFLPAPVAVQQLSLAPGERREVVIDMSQGNEVSITAGESA EEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCC GIMDRLRGLFEPSSILISTLVLTLKPTGLLPLVTDNLPMRLLADQIIEGSVIRSREFQLG CHHHHHHHHCCCHHHHHHHHHEEECCCCCEEEEECCCCHHHHHHHHHCCCEEECCCEECC DNLPGINGAIWDMNRVDVQAQQGTWERWIIHADMPQAFHIQGVSFLVKSVNGAAAMAEDR CCCCCCCCEEECCCEEEEEECCCCCEEEEEECCCCCEEEECHHHHHHHHCCCCEEECCCC GWKDTVWVDGTVELWVYFNQVSSPQFPFLFYSQTLEMADRGSAGQLVTVAAPTL CCCCEEEECCEEEEEEEEECCCCCCCCEEEEHHHHHHHCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 1557036; 9298646 [H]