| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is asoB [H]
Identifier: 218927848
GI number: 218927848
Start: 715677
End: 716927
Strand: Direct
Name: asoB [H]
Synonym: YPO0655
Alternate gene names: 218927848
Gene position: 715677-716927 (Clockwise)
Preceding gene: 218927847
Following gene: 218927850
Centisome position: 15.38
GC content: 52.68
Gene sequence:
>1251_bases GTGGGTGGGTTAAAGCAAGAGTTAAGTCTGGCGCAAGGCGTTGGGTTGTTATCCACTTCCCTGTTGGGGACGGGGGTTTT TGCTGTGCCAGCATTGGCGGCAATGTTGGCGGGCCATGATAGTTTATGGGCCTGGCCAGTATTAATCGTACTGGTCTTCC CAATCGCTATCGCCTTTGCGGCGCTGGGGCGTCATTTCCCCAGTGCAGGGGGGGCAGCACACTTTGTTGCCATCGCTTTT GGTCCGAAACTGGGTAAAGTCACGGGCTGGCTATTTTTATCGGTTATTCCGGTCGGGCTGCCTGCGGCCTTGCAAATAGC GGCCGGATTCTGGCAAGCGATGTTTGGTTGGAGTGACACCGGGTTGCTAATGGTGCAACTGGTGACCTTGCTGGTTATCT GGCTACTGGGCACCCGTAGCGCCGGTTCAAGCGCCAATCTACAAACCGTGATTGCACTACTGGTAATAGCGTTGGTGGCC GCAATTTGGTGGCAGGGGGATATCCGCCTATCGCAGATCCCATGGCCAGCGCTACAAGATGTTTCCCCACCCAATATATT CAACGCGTTAGCCGTGATGTTCTGGTGTTTTGTTGGTTTAGAGGCTTTTGCTCATTTGGCAACGGAATTTCGTCATCCTG AGCGTGACTTCCCACGGGCCTTGATCGTCGGGTTATTGGTTGCTGGTGCGGTTTATTGGGGGTGTACTGTCGCGGTGCTG CATTTTCAGGCTTATGGTGAGTCGCAGGCTGCCGCGGCTTCACTGCCGGGGATCGTGGTACAACTGTTTGGTGAACATGC GCTGTGGATTGCCTGCATTATTGGCTATCTGGCCTGTTTTGCCAGCGTGAATATTTATACTCAAAGTTTTGCTCGCATGG TGTGGTCGCAGTCTCAGGTTCGTCCACAAAGTAAACTGGCGCGTTTATCTGCCGGTCAAACGCCAGTTAATGCGCTGACC GCTGTGGTCGGCAGTTGTCTGGTCTTCGCGCTGCTAATCTACTGGCTTGCTTTGCCACTGGATTTACTGATTGTGTATGC CAACGGTATTTTCGTGCTGATTTACTTGCTGTGTATGCTGGCAGGGATCCGCTTATTGAGTGGACGCGCGCGGGTGATGT CAGTGATTGGCAGTCTTCTCTGCTGTGTATTACTGGTCATGATTGGCTGGAAAAGTGTATACGCTTTGCTGATGTTTGCG CTGTTGTGGATGTTGATGTCTAAGCCAAAGACGCAGCTAACTCAGCCTTAA
Upstream 100 bases:
>100_bases GAATTTTGAAGATGGTGTCTCTACCACCAATATTATTCAGTCGATCAAAAACGGCCGCGGCTAAGTCAGCGCCAGAGCGC TGGCGCATAAGGATGTGGCA
Downstream 100 bases:
>100_bases TGTGTTGGAATACAAAATATTTAGGGCACCTGATGGGCGCCCTGAGGTTATTGACAAAGTGCCCGCGACGGAGAGAACAG GCAGATCGTAAAGACGCCGT
Product: inner membrane protein YjeH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MGGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAMLAGHDSLWAWPVLIVLVFPIAIAFAALGRHFPSAGGAAHFVAIAF GPKLGKVTGWLFLSVIPVGLPAALQIAAGFWQAMFGWSDTGLLMVQLVTLLVIWLLGTRSAGSSANLQTVIALLVIALVA AIWWQGDIRLSQIPWPALQDVSPPNIFNALAVMFWCFVGLEAFAHLATEFRHPERDFPRALIVGLLVAGAVYWGCTVAVL HFQAYGESQAAAASLPGIVVQLFGEHALWIACIIGYLACFASVNIYTQSFARMVWSQSQVRPQSKLARLSAGQTPVNALT AVVGSCLVFALLIYWLALPLDLLIVYANGIFVLIYLLCMLAGIRLLSGRARVMSVIGSLLCCVLLVMIGWKSVYALLMFA LLWMLMSKPKTQLTQP
Sequences:
>Translated_416_residues MGGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAMLAGHDSLWAWPVLIVLVFPIAIAFAALGRHFPSAGGAAHFVAIAF GPKLGKVTGWLFLSVIPVGLPAALQIAAGFWQAMFGWSDTGLLMVQLVTLLVIWLLGTRSAGSSANLQTVIALLVIALVA AIWWQGDIRLSQIPWPALQDVSPPNIFNALAVMFWCFVGLEAFAHLATEFRHPERDFPRALIVGLLVAGAVYWGCTVAVL HFQAYGESQAAAASLPGIVVQLFGEHALWIACIIGYLACFASVNIYTQSFARMVWSQSQVRPQSKLARLSAGQTPVNALT AVVGSCLVFALLIYWLALPLDLLIVYANGIFVLIYLLCMLAGIRLLSGRARVMSVIGSLLCCVLLVMIGWKSVYALLMFA LLWMLMSKPKTQLTQP >Mature_415_residues GGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAMLAGHDSLWAWPVLIVLVFPIAIAFAALGRHFPSAGGAAHFVAIAFG PKLGKVTGWLFLSVIPVGLPAALQIAAGFWQAMFGWSDTGLLMVQLVTLLVIWLLGTRSAGSSANLQTVIALLVIALVAA IWWQGDIRLSQIPWPALQDVSPPNIFNALAVMFWCFVGLEAFAHLATEFRHPERDFPRALIVGLLVAGAVYWGCTVAVLH FQAYGESQAAAASLPGIVVQLFGEHALWIACIIGYLACFASVNIYTQSFARMVWSQSQVRPQSKLARLSAGQTPVNALTA VVGSCLVFALLIYWLALPLDLLIVYANGIFVLIYLLCMLAGIRLLSGRARVMSVIGSLLCCVLLVMIGWKSVYALLMFAL LWMLMSKPKTQLTQP
Specific function: Unknown
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790584, Length=411, Percent_Identity=70.316301703163, Blast_Score=543, Evalue=1e-156, Organism=Escherichia coli, GI2367353, Length=322, Percent_Identity=25.776397515528, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 44616; Mature: 44485
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAMLAGHDSLWAWPVLIVLVFPIAIAFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALGRHFPSAGGAAHFVAIAFGPKLGKVTGWLFLSVIPVGLPAALQIAAGFWQAMFGWSDT HHHHHCCCCCCHHHEEHEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC GLLMVQLVTLLVIWLLGTRSAGSSANLQTVIALLVIALVAAIWWQGDIRLSQIPWPALQD HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHCC VSPPNIFNALAVMFWCFVGLEAFAHLATEFRHPERDFPRALIVGLLVAGAVYWGCTVAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HFQAYGESQAAAASLPGIVVQLFGEHALWIACIIGYLACFASVNIYTQSFARMVWSQSQV HHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPQSKLARLSAGQTPVNALTAVVGSCLVFALLIYWLALPLDLLIVYANGIFVLIYLLCML CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGIRLLSGRARVMSVIGSLLCCVLLVMIGWKSVYALLMFALLWMLMSKPKTQLTQP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAMLAGHDSLWAWPVLIVLVFPIAIAFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALGRHFPSAGGAAHFVAIAFGPKLGKVTGWLFLSVIPVGLPAALQIAAGFWQAMFGWSDT HHHHHCCCCCCHHHEEHEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC GLLMVQLVTLLVIWLLGTRSAGSSANLQTVIALLVIALVAAIWWQGDIRLSQIPWPALQD HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHCC VSPPNIFNALAVMFWCFVGLEAFAHLATEFRHPERDFPRALIVGLLVAGAVYWGCTVAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HFQAYGESQAAAASLPGIVVQLFGEHALWIACIIGYLACFASVNIYTQSFARMVWSQSQV HHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPQSKLARLSAGQTPVNALTAVVGSCLVFALLIYWLALPLDLLIVYANGIFVLIYLLCML CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGIRLLSGRARVMSVIGSLLCCVLLVMIGWKSVYALLMFALLWMLMSKPKTQLTQP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]