Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218927706
Identifier: 218927706
GI number: 218927706
Start: 544918
End: 545490
Strand: Direct
Name: 218927706
Synonym: YPO0508
Alternate gene names: NA
Gene position: 544918-545490 (Clockwise)
Preceding gene: 218927705
Following gene: 218927707
Centisome position: 11.71
GC content: 52.53
Gene sequence:
>573_bases ATGCGCATCATTCGCCCGCAACAGCTCGTGGTCTTGAAAAGCAGTTACCAGATAGGCCATGAAAGCCATATGGGGATCAG CGTCGTTGCTGGCTGTTATCTCTCTAAACCTGAGCATATGGTGACGGAGTCACAGATCTGGCAGGCATGGAAAGCGGCAC CGCTCTCTTTCCGCATGTTGGACAGTGCTGAGCCAAAACCCTTTGCTGAGTTTTTGCTGGCCGGTCATGCCGGTATTGGT GAAGAGGTTACCTCGCTGAGTGCAGAGGTTAGTGTTGGCTCACTGACCCGGCGCTGGTGTATTGAGGGCGAAAGCAACAA AACGGGTCTGGTCATTAAACCTTTCTTACGTATGTCGATGGACCATACGCAAAGTTGGGGGGGCAAAGGCTGTAAGGAGA ATCCACTGGGACGTGGGTATAACGATGAGCGCAAACCGACGATTATGTCTTTAGGCCTTGACGGCTCTGCTATCGTTCGC TCACCGCTGGCGTCTCCGTCACCTGTGCCTCATGACTTCCAACTGCGTAAAGTGCATATCAATGAAGTCGCCTCGACCAT GACCGATCCTTAA
Upstream 100 bases:
>100_bases CACGGGATTATCCGTCAGTTATACCGGCGCTCAATATTCCGATGTGGGTGTCGATCTGAAAACCGTTGGCATGCAAAGCA AAAACTGAAAAGGAAGCATT
Downstream 100 bases:
>100_bases TATCTGGAAACATTTTATCCCGGTTTGCCACCGCAAATTGATCGTCGCTATTTCCAAATGGCTCCGCCAGGGCAGTGGCT GAAGAAAAGTGCATGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRMLDSAEPKPFAEFLLAGHAGIG EEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSMDHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVR SPLASPSPVPHDFQLRKVHINEVASTMTDP
Sequences:
>Translated_190_residues MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRMLDSAEPKPFAEFLLAGHAGIG EEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSMDHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVR SPLASPSPVPHDFQLRKVHINEVASTMTDP >Mature_190_residues MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRMLDSAEPKPFAEFLLAGHAGIG EEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSMDHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVR SPLASPSPVPHDFQLRKVHINEVASTMTDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20883; Mature: 20883
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRML CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEC DSAEPKPFAEFLLAGHAGIGEEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSM CCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHEECCCCCCCCEEEHHHHHHHH DHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVRSPLASPSPVPHDFQLRKVHI HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEH NEVASTMTDP HHHHHHHCCC >Mature Secondary Structure MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRML CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEC DSAEPKPFAEFLLAGHAGIGEEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSM CCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHEECCCCCCCCEEEHHHHHHHH DHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVRSPLASPSPVPHDFQLRKVHI HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEH NEVASTMTDP HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA