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The map label for this gene is yjcF [C]

Identifier: 218927707

GI number: 218927707

Start: 545515

End: 547137

Strand: Direct

Name: yjcF [C]

Synonym: YPO0509

Alternate gene names: 218927707

Gene position: 545515-547137 (Clockwise)

Preceding gene: 218927706

Following gene: 218927708

Centisome position: 11.72

GC content: 48.8

Gene sequence:

>1623_bases
TTGCCACCGCAAATTGATCGTCGCTATTTCCAAATGGCTCCGCCAGGGCAGTGGCTGAAGAAAAGTGCATGGCCTGATAG
CGTACCGTTCAAACTCATCGGTTTTCGCCCGGACAATGAGGAGATCAGCGGTGCGTTTCCTGCGGTCAGTGCAAGGGCGT
TTGTTTGGGATAACCCTTCAGCGCCCCCCAGTGAGGTGACCTTACTGCGGAAAACACTGTGGCTGTTACCGGATAACGAT
ATGGGGCTAATGGTGTTTACCGGCAGCGTGCCACTGACTCACCTTTTTGATGAGCCTATCGATACGTTGCTGGTGGGATT
GGATGACTCCCATTCGCTACGTGAGTTGGAATATTACCAACAGGTCTATAAAAGTCGCAGCGTTGAAGGTGCTGCGAGTT
TTGAATTCCTCAAAGATCCGGAACTGATGCCAGAGGGGATGCCGCTGAACGTCATCCGGGATTTGGCGGATCACCCAGAC
TCGCTGCGTTATAGCGCTTCCGCCATGTCTGAAGCGGAGTCCGAACGTTTCTATCAGGATGTTCAGGATGCTATCGATCG
GCAGGAACAGCAGAAGAGTGAAGAACAAGAGACGCTGGGTGATTTGAATGTCCCCGCAGCCGGCAAAGAGGAAGCGGGAA
CCCAATGGTTGGAAAGCAAAGAAGATACGGCAACCAACGTCACATTTTTAGGGACTGACTTCTCTGGAATGACCTTGGAC
AACAAGCAATTCCGCTATTGCATGTTTACCGGTTGCCATTTTGACAAGGCGACATTTAAAGACTGCACCTTCGAGCATTG
CCAGTTTACGCAAAGTGATTTTGAAAACTCCCGTTGGAACAATGTGCATTTAAGTGGCTGTTTATTCAAACAGGCAGAGT
GGCAAAAAGCCGCCTTTACCCACTGTAAATGGGAGAAATCCACCTTTGAGTATGGGGTGTTTAAACACGCTCAGTTTACC
GACAATGCGTTAGATAACTGCCTGATTAACCATAGTGATTTCAGCCTTGGCACGTTTGATCATTGTACGCTGAATGGCTG
TTTCTTCTCCGAAACACATTGTGATCAAACACAATTTAATCAGGTCATCATCACGTCGTGCATATTCGAAAAATGCGACG
GCCCGAAGGCTTGCTTTACCGAAAGCACGATAGAGAAAACCTCGTTTATTAGCAGCAGTTGGGTGGGGGGGCGCTTGAGT
CATTGCTATCTCAATAGCTTGACCACGGGCCTGAATACCAATCTCTCTGAGTCGCATTTTGAGCAGTGCAGCCTGAATAA
AATGGGCTTCCTCAAGGTCAATTTACAATCCAGTACCTTTATTAATTGCTCGATGTTGGAGAGTTGCTGCGATAAGGCTG
ATTTCTCTCAGGCGACGCTGATTGCCTGTGATATGACCGCGGTACGGTTAAAAGATGCCAACTTAGTCCATAGCCACTGG
CAGAACACCAGCTTACAGCAAAGCATGTTTTACAACGCTGACTTACGTGATGCCACTTTCCAGCGTTGCAATCTGGCGGG
CGCTAATCTGGCGATGATCAGCCAAAACATGGACACCCGATTTGAACATTGTTTGACGGAAAAGACGCACTGGATCCCGC
GTCGTTACACCGTCCCTGCATAA

Upstream 100 bases:

>100_bases
GTCACCTGTGCCTCATGACTTCCAACTGCGTAAAGTGCATATCAATGAAGTCGCCTCGACCATGACCGATCCTTAATATC
TGGAAACATTTTATCCCGGT

Downstream 100 bases:

>100_bases
ATATCACGTTTCAAAGGAGCATGGAATGACACCGTCCGACACCCCTATTATGCCTCCCGACAGTCCACGTCGGATTATTG
GCCGGCACTTTACACAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; Exported Protein

Number of amino acids: Translated: 540; Mature: 539

Protein sequence:

>540_residues
MPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEEISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDND
MGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQQVYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPD
SLRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGDLNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLD
NKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNNVHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFT
DNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFNQVIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLS
HCYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFINCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHW
QNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRFEHCLTEKTHWIPRRYTVPA

Sequences:

>Translated_540_residues
MPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEEISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDND
MGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQQVYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPD
SLRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGDLNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLD
NKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNNVHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFT
DNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFNQVIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLS
HCYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFINCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHW
QNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRFEHCLTEKTHWIPRRYTVPA
>Mature_539_residues
PPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEEISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDM
GLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQQVYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDS
LRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGDLNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLDN
KQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNNVHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTD
NALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFNQVIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSH
CYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFINCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHWQ
NTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRFEHCLTEKTHWIPRRYTVPA

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61393; Mature: 61262

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEEISGAFPAVSARAFVWDNPS
CCCCCCCHHEECCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCC
APPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQ
CCHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHCCHHHEEEECCCCCHHHHHHHHH
QVYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDSLRYSASAMSEAESERFYQD
HHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VQDAIDRQEQQKSEEQETLGDLNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHCCCCCCCEEEEEECCCCCCEEC
NKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNNVHLSGCLFKQAEWQKAAFT
CCCEEEEEEECCCCCCCHHCCCCHHHHHCCHHHHCCCCCCEEEEEEEEECHHHHHHHHHH
HCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFN
HCCCCCCCHHHCCEECCCCCHHHHHHHEECCCCCCCCCCCCEEECCEEECCCCCCHHHHH
QVIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSHCYLNSLTTGLNTNLSESHF
HHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHH
EQCSLNKMGFLKVNLQSSTFINCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHW
HHHCCCCCEEEEEEECCCCEECHHHHHHHHCCCCCCCEEEEEECCEEEEEECCHHHHHHH
QNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRFEHCLTEKTHWIPRRYTVPA
CCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEECCC
>Mature Secondary Structure 
PPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEEISGAFPAVSARAFVWDNPS
CCCCCCHHEECCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCC
APPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQ
CCHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHCCHHHEEEECCCCCHHHHHHHHH
QVYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDSLRYSASAMSEAESERFYQD
HHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VQDAIDRQEQQKSEEQETLGDLNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHCCCCCCCEEEEEECCCCCCEEC
NKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNNVHLSGCLFKQAEWQKAAFT
CCCEEEEEEECCCCCCCHHCCCCHHHHHCCHHHHCCCCCCEEEEEEEEECHHHHHHHHHH
HCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFN
HCCCCCCCHHHCCEECCCCCHHHHHHHEECCCCCCCCCCCCEEECCEEECCCCCCHHHHH
QVIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSHCYLNSLTTGLNTNLSESHF
HHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHH
EQCSLNKMGFLKVNLQSSTFINCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHW
HHHCCCCCEEEEEEECCCCEECHHHHHHHHCCCCCCCEEEEEECCEEEEEECCHHHHHHH
QNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRFEHCLTEKTHWIPRRYTVPA
CCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA