Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
---|---|
Accession | NC_003106 |
Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15921616
Identifier: 15921616
GI number: 15921616
Start: 1345504
End: 1346523
Strand: Direct
Name: 15921616
Synonym: ST1335
Alternate gene names: NA
Gene position: 1345504-1346523 (Clockwise)
Preceding gene: 15921615
Following gene: 15921621
Centisome position: 49.93
GC content: 33.24
Gene sequence:
>1020_bases ATGTCACAAGGAAGTAACATAAAAAAGAGTCCCTATGAGAAATTAAGGACTATCCTAGAATATCTCGTATTTGCCAAAAA TTGCACAAAAAACATTAAAAATATCCTAGAAAAAAATGAGCTCTTTATCAAAGATGAAGATGTGAGTTATGGCCCACATA CTCTCTTAAAGCTGGCTTACCTGTACTACTACTTCGATATAGCTCTGGAAATTGCAAAAAAACATTTTGACAAGCTCATC TTTGTTGATGCCTTCGGAGGAAGCGGATTAGTTAGAATAAAAAATTCAGACTATGTATCTTTAGGTTCATCACTCCTTGC CCTAGTCTTTAAGTCACGATCTGGAAAGGCGAGATTCAATAAGATAATAAGCATAGAAATGGAGTCTAAGAGGGCTTATT TGCTAAGAAGAAGACTCGAAGTGCTCAAAAAAGAATTAGGAATAGATACAGATTTTAAAGTGATACGAGACGATGTAAAT AAGAAAATCAATGATGTAGCTAACGACATAAACAAAAGAGATTATGGTATTCTGTTCGTAGATCCTGAAGGTGTAGAAAT ACAACTTCAAAATCTATCCATTATATTATCAAAGTCAATAGGTATAGATGTTATCCTTAATCAATCGGAAGGGGTCTATA GGCTATTAGGCAGAGCCCAAAATGGGGATGATAGTGCCTTAAAAAAACTAGTAGAATACTTACCGACTTTAGCCAGTATT AAGGACCCAGACAAAGCGAGAGATTTATTATTTAGACTATTTGGGAAACCCATAGAAGCTACAGCGGAAATTAGAGATGA GAATAATAAGCCTATATATGAACTCGTCCTTAGAGTTAGACGGACAAAATCTGATACACCGTGGATAAGACCAATGAAAG AATTTTCTGAGATGATTAGTAAATATAACGGTAGAGATGTATTGAACATTTTAGATCAAATCCATAATAAAAGGACAACA ATTTTAGATCAAATTAATAGAAAAAATACTGATATAACAAGTTTCTTTAAAAAATACTAA
Upstream 100 bases:
>100_bases AAAGACTGGGAAAAAGTTATTGTTATTATCTTTTGTTTTCCGAGTATTCAGGTGATCAAACTAAAAGAAATTTAAATATG TTTTACATAATATTTTAGGA
Downstream 100 bases:
>100_bases CTATGATACTCATACCACCACTTACCCTTCAAATTATATTTTAGGAGTAACGCTTTAAACATCTTACCTAGTAAGTAATC CTTTTCAGCATCTACTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSQGSNIKKSPYEKLRTILEYLVFAKNCTKNIKNILEKNELFIKDEDVSYGPHTLLKLAYLYYYFDIALEIAKKHFDKLI FVDAFGGSGLVRIKNSDYVSLGSSLLALVFKSRSGKARFNKIISIEMESKRAYLLRRRLEVLKKELGIDTDFKVIRDDVN KKINDVANDINKRDYGILFVDPEGVEIQLQNLSIILSKSIGIDVILNQSEGVYRLLGRAQNGDDSALKKLVEYLPTLASI KDPDKARDLLFRLFGKPIEATAEIRDENNKPIYELVLRVRRTKSDTPWIRPMKEFSEMISKYNGRDVLNILDQIHNKRTT ILDQINRKNTDITSFFKKY
Sequences:
>Translated_339_residues MSQGSNIKKSPYEKLRTILEYLVFAKNCTKNIKNILEKNELFIKDEDVSYGPHTLLKLAYLYYYFDIALEIAKKHFDKLI FVDAFGGSGLVRIKNSDYVSLGSSLLALVFKSRSGKARFNKIISIEMESKRAYLLRRRLEVLKKELGIDTDFKVIRDDVN KKINDVANDINKRDYGILFVDPEGVEIQLQNLSIILSKSIGIDVILNQSEGVYRLLGRAQNGDDSALKKLVEYLPTLASI KDPDKARDLLFRLFGKPIEATAEIRDENNKPIYELVLRVRRTKSDTPWIRPMKEFSEMISKYNGRDVLNILDQIHNKRTT ILDQINRKNTDITSFFKKY >Mature_338_residues SQGSNIKKSPYEKLRTILEYLVFAKNCTKNIKNILEKNELFIKDEDVSYGPHTLLKLAYLYYYFDIALEIAKKHFDKLIF VDAFGGSGLVRIKNSDYVSLGSSLLALVFKSRSGKARFNKIISIEMESKRAYLLRRRLEVLKKELGIDTDFKVIRDDVNK KINDVANDINKRDYGILFVDPEGVEIQLQNLSIILSKSIGIDVILNQSEGVYRLLGRAQNGDDSALKKLVEYLPTLASIK DPDKARDLLFRLFGKPIEATAEIRDENNKPIYELVLRVRRTKSDTPWIRPMKEFSEMISKYNGRDVLNILDQIHNKRTTI LDQINRKNTDITSFFKKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39173; Mature: 39042
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGSNIKKSPYEKLRTILEYLVFAKNCTKNIKNILEKNELFIKDEDVSYGPHTLLKLAY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHH LYYYFDIALEIAKKHFDKLIFVDAFGGSGLVRIKNSDYVSLGSSLLALVFKSRSGKARFN HHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHH KIISIEMESKRAYLLRRRLEVLKKELGIDTDFKVIRDDVNKKINDVANDINKRDYGILFV EEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE DPEGVEIQLQNLSIILSKSIGIDVILNQSEGVYRLLGRAQNGDDSALKKLVEYLPTLASI CCCCCEEEEECEEEEEECCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCC KDPDKARDLLFRLFGKPIEATAEIRDENNKPIYELVLRVRRTKSDTPWIRPMKEFSEMIS CCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH KYNGRDVLNILDQIHNKRTTILDQINRKNTDITSFFKKY HCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure SQGSNIKKSPYEKLRTILEYLVFAKNCTKNIKNILEKNELFIKDEDVSYGPHTLLKLAY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHH LYYYFDIALEIAKKHFDKLIFVDAFGGSGLVRIKNSDYVSLGSSLLALVFKSRSGKARFN HHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHH KIISIEMESKRAYLLRRRLEVLKKELGIDTDFKVIRDDVNKKINDVANDINKRDYGILFV EEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE DPEGVEIQLQNLSIILSKSIGIDVILNQSEGVYRLLGRAQNGDDSALKKLVEYLPTLASI CCCCCEEEEECEEEEEECCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCC KDPDKARDLLFRLFGKPIEATAEIRDENNKPIYELVLRVRRTKSDTPWIRPMKEFSEMIS CCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH KYNGRDVLNILDQIHNKRTTILDQINRKNTDITSFFKKY HCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA