Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
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Accession | NC_003106 |
Length | 2,694,756 |
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The map label for this gene is 15921621
Identifier: 15921621
GI number: 15921621
Start: 1350474
End: 1350872
Strand: Direct
Name: 15921621
Synonym: ST1340
Alternate gene names: NA
Gene position: 1350474-1350872 (Clockwise)
Preceding gene: 15921616
Following gene: 15921623
Centisome position: 50.11
GC content: 36.34
Gene sequence:
>399_bases ATGATACGTGTCGCGTATCAAATATATAAATCTTTTTGTACGTGTCACGTAGCAGTATGCATATATTCATTACATATTCT TAGTATAATTTACTACGTGAAACGTACAGAGTTAACTGAAATGCAGCAAAGGGTATTATTATTCCTTCTAGAGAATGACG GCTCAGCATTCAGGGACATATCTGACAAAACAGAAAGCAACCCGAATGCGATAAAAAAGGCTATAGATGAGTTAATGGAA TTGGGCTTAGTTTACGATAAGAGGGAGGACACGTTCCCAAGAAGGAGGCTTATATATTTGACCGAGTATGGAAAGGAAGT TGCTAAGAGGCTAAAAGAAATAGTAGAGATTATTAATGAGAGTTCTAAACATCCGCAAAAGCCTTCAGTTGAAGTTTAA
Upstream 100 bases:
>100_bases TCTTTAGTATAGATACTATTTCCTTATCGTTTTTTGGACCGTCTAATAAGACCAGTAAGATTTTCGCCGACGGGAGAACT AACATATCTCTTATTTTCAT
Downstream 100 bases:
>100_bases TCTAAATTTAGCATTTTTCTAATAGCTTCATATTTATTCTCCTTCAATTCGGTATATATTACCTCTACTCGTACTTTTGC ATCTTCCAGGCTTTTTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MIRVAYQIYKSFCTCHVAVCIYSLHILSIIYYVKRTELTEMQQRVLLFLLENDGSAFRDISDKTESNPNAIKKAIDELME LGLVYDKREDTFPRRRLIYLTEYGKEVAKRLKEIVEIINESSKHPQKPSVEV
Sequences:
>Translated_132_residues MIRVAYQIYKSFCTCHVAVCIYSLHILSIIYYVKRTELTEMQQRVLLFLLENDGSAFRDISDKTESNPNAIKKAIDELME LGLVYDKREDTFPRRRLIYLTEYGKEVAKRLKEIVEIINESSKHPQKPSVEV >Mature_132_residues MIRVAYQIYKSFCTCHVAVCIYSLHILSIIYYVKRTELTEMQQRVLLFLLENDGSAFRDISDKTESNPNAIKKAIDELME LGLVYDKREDTFPRRRLIYLTEYGKEVAKRLKEIVEIINESSKHPQKPSVEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15490; Mature: 15490
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVAYQIYKSFCTCHVAVCIYSLHILSIIYYVKRTELTEMQQRVLLFLLENDGSAFRDI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH SDKTESNPNAIKKAIDELMELGLVYDKREDTFPRRRLIYLTEYGKEVAKRLKEIVEIINE HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC SSKHPQKPSVEV CCCCCCCCCCCC >Mature Secondary Structure MIRVAYQIYKSFCTCHVAVCIYSLHILSIIYYVKRTELTEMQQRVLLFLLENDGSAFRDI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH SDKTESNPNAIKKAIDELMELGLVYDKREDTFPRRRLIYLTEYGKEVAKRLKEIVEIINE HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC SSKHPQKPSVEV CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA