Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
---|---|
Accession | NC_003106 |
Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15921573
Identifier: 15921573
GI number: 15921573
Start: 1309181
End: 1310584
Strand: Direct
Name: 15921573
Synonym: ST1304
Alternate gene names: NA
Gene position: 1309181-1310584 (Clockwise)
Preceding gene: 15921572
Following gene: 15921577
Centisome position: 48.58
GC content: 39.46
Gene sequence:
>1404_bases ATGGCAGTTGAAACAGCACCCTCCTTAAGCTCCTTAGGCGGAATATTAGGAGGAATCATAGGCGGAGAAATAATACTAGA TCAACAACAAGCTAATTGCGTAATAGAAAACCTAAAAAGATACAACTCACTAGAAACAGCACAAAGATACGAGATTTACC CCGCAATAGCCTCAAGTAGAAGAGTATTAAAAGAAGCCTCAAACTCCCCAGAAAAAATCTTCAGACAAGGAATACTCATA AAAACAACAGACACGGGAGATTGGTTTTACATAGGCGGAATCTCCCCATACTGGTCCCCAGACCAACTAATAGTATACCA AGGAGGATCACAAGCAACATCACCAGGAAAACTAAATAGAAAAACAATCGACGACCTAGCAGACAAAGGACTAGGAGCAA TACCACTAATCAAAACAAAAACACCACCAACATGGTACAACCCACCACTATTCAAAAACTGCCAAGGAACATTCAACATC TTCTGGAACTACCTAGCAGAATTCCAGGGAGGCATACTAACAATATTTACCAACGCACCAATGGTAATGCATTATAGTCA GTTACTGGCTCTTGGAAAGGCTAGTTTAACATATTCATCGGGGGGTAGTTATTATCTTTCTATAGCTGCTAGAAATGATG TAATGCGTCCTGCCTCAGATACATATCCTTACATCTACTTTGCCTATGGCACTAACCCAGTGGTGGCAAAGAGTCACGGT TTGAAAATCTACCCCGGTTTTACATTTGATACTGTGACTAAAGAGGTCTTATCAAATTGTAGCGAAATAATGCCTAAGCA ATATTGTTCTTTAAGTTTCCTAGACACTAGGTTTAATGATATTGATATTGGTGCTCTTGTTTATGCTGTGTTACCTTGTG GTACATCTTGCTCCCAGTTTGGTTTAGCTGGGTTAATTCTTGGTATTTCTCAAATAACAATTAAGGGTGTACAACTAGTT TATCTAAGAATTGCTCAGCCTCCTTCTGACTTAACTACTACTGCTATAATTGAGTGGGCTAAGATGATGAACGTTTATGA TTCACTAAATAGTCTCATGGGTGCGAGTAAGAGGTTTAAGAAGGCTGTTTCTGATCTTTCTCTTGCGTTTCCGCAGTTTA TTGCTACTGCTGCTGCACTCATTGTGGATTGGGTTGAGGTTTCTTATGATGATGGTTTAAAAGAGGCTGAGGAGAAGGCT AAGGAGTTGAAGGAGATGTATGATAAGGTTGTTGATGAACTGGCTGGTAAGCCCCCATCAATAACCAATAGGTACGTTTA TAATCAGTGGTGGAAGTATAAGACTAGAGTAGAGGAGTGTGCTAAAGAAATAATACTAAACAACCCAGATATAACATATG AAGAACTATTAAATGAAGTAGACCAGTGTGCGGTGCTAGAGTAA
Upstream 100 bases:
>100_bases TCCTCTTTTTTAACTCAGTTGTCGACTTTTAATCTTTATATTAAATATGTTAATTAATGTTTTGGAATAGATTTAAATAT TTAAAATAATAGAATAAAAT
Downstream 100 bases:
>100_bases GGAATAATGTAATGATTGTCTATCCTATAGTATTCTCCTCATATTTTCTCATTTTATCTTAAACATTTTTTCTTCACTCT TAGTCAGTCTAAAAAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MAVETAPSLSSLGGILGGIIGGEIILDQQQANCVIENLKRYNSLETAQRYEIYPAIASSRRVLKEASNSPEKIFRQGILI KTTDTGDWFYIGGISPYWSPDQLIVYQGGSQATSPGKLNRKTIDDLADKGLGAIPLIKTKTPPTWYNPPLFKNCQGTFNI FWNYLAEFQGGILTIFTNAPMVMHYSQLLALGKASLTYSSGGSYYLSIAARNDVMRPASDTYPYIYFAYGTNPVVAKSHG LKIYPGFTFDTVTKEVLSNCSEIMPKQYCSLSFLDTRFNDIDIGALVYAVLPCGTSCSQFGLAGLILGISQITIKGVQLV YLRIAQPPSDLTTTAIIEWAKMMNVYDSLNSLMGASKRFKKAVSDLSLAFPQFIATAAALIVDWVEVSYDDGLKEAEEKA KELKEMYDKVVDELAGKPPSITNRYVYNQWWKYKTRVEECAKEIILNNPDITYEELLNEVDQCAVLE
Sequences:
>Translated_467_residues MAVETAPSLSSLGGILGGIIGGEIILDQQQANCVIENLKRYNSLETAQRYEIYPAIASSRRVLKEASNSPEKIFRQGILI KTTDTGDWFYIGGISPYWSPDQLIVYQGGSQATSPGKLNRKTIDDLADKGLGAIPLIKTKTPPTWYNPPLFKNCQGTFNI FWNYLAEFQGGILTIFTNAPMVMHYSQLLALGKASLTYSSGGSYYLSIAARNDVMRPASDTYPYIYFAYGTNPVVAKSHG LKIYPGFTFDTVTKEVLSNCSEIMPKQYCSLSFLDTRFNDIDIGALVYAVLPCGTSCSQFGLAGLILGISQITIKGVQLV YLRIAQPPSDLTTTAIIEWAKMMNVYDSLNSLMGASKRFKKAVSDLSLAFPQFIATAAALIVDWVEVSYDDGLKEAEEKA KELKEMYDKVVDELAGKPPSITNRYVYNQWWKYKTRVEECAKEIILNNPDITYEELLNEVDQCAVLE >Mature_466_residues AVETAPSLSSLGGILGGIIGGEIILDQQQANCVIENLKRYNSLETAQRYEIYPAIASSRRVLKEASNSPEKIFRQGILIK TTDTGDWFYIGGISPYWSPDQLIVYQGGSQATSPGKLNRKTIDDLADKGLGAIPLIKTKTPPTWYNPPLFKNCQGTFNIF WNYLAEFQGGILTIFTNAPMVMHYSQLLALGKASLTYSSGGSYYLSIAARNDVMRPASDTYPYIYFAYGTNPVVAKSHGL KIYPGFTFDTVTKEVLSNCSEIMPKQYCSLSFLDTRFNDIDIGALVYAVLPCGTSCSQFGLAGLILGISQITIKGVQLVY LRIAQPPSDLTTTAIIEWAKMMNVYDSLNSLMGASKRFKKAVSDLSLAFPQFIATAAALIVDWVEVSYDDGLKEAEEKAK ELKEMYDKVVDELAGKPPSITNRYVYNQWWKYKTRVEECAKEIILNNPDITYEELLNEVDQCAVLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51809; Mature: 51678
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVETAPSLSSLGGILGGIIGGEIILDQQQANCVIENLKRYNSLETAQRYEIYPAIASSR CCCCCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCHHHHHHHEEHHHHHHHH RVLKEASNSPEKIFRQGILIKTTDTGDWFYIGGISPYWSPDQLIVYQGGSQATSPGKLNR HHHHHHCCCHHHHHHCCCEEEEECCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCH KTIDDLADKGLGAIPLIKTKTPPTWYNPPLFKNCQGTFNIFWNYLAEFQGGILTIFTNAP HHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCC MVMHYSQLLALGKASLTYSSGGSYYLSIAARNDVMRPASDTYPYIYFAYGTNPVVAKSHG HHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCC LKIYPGFTFDTVTKEVLSNCSEIMPKQYCSLSFLDTRFNDIDIGALVYAVLPCGTSCSQF EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCCCCHHHHHHHHHCCCCCHHHH GLAGLILGISQITIKGVQLVYLRIAQPPSDLTTTAIIEWAKMMNVYDSLNSLMGASKRFK HHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAVSDLSLAFPQFIATAAALIVDWVEVSYDDGLKEAEEKAKELKEMYDKVVDELAGKPPS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC ITNRYVYNQWWKYKTRVEECAKEIILNNPDITYEELLNEVDQCAVLE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure AVETAPSLSSLGGILGGIIGGEIILDQQQANCVIENLKRYNSLETAQRYEIYPAIASSR CCCCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCHHHHHHHEEHHHHHHHH RVLKEASNSPEKIFRQGILIKTTDTGDWFYIGGISPYWSPDQLIVYQGGSQATSPGKLNR HHHHHHCCCHHHHHHCCCEEEEECCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCH KTIDDLADKGLGAIPLIKTKTPPTWYNPPLFKNCQGTFNIFWNYLAEFQGGILTIFTNAP HHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCC MVMHYSQLLALGKASLTYSSGGSYYLSIAARNDVMRPASDTYPYIYFAYGTNPVVAKSHG HHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCC LKIYPGFTFDTVTKEVLSNCSEIMPKQYCSLSFLDTRFNDIDIGALVYAVLPCGTSCSQF EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCCCCHHHHHHHHHCCCCCHHHH GLAGLILGISQITIKGVQLVYLRIAQPPSDLTTTAIIEWAKMMNVYDSLNSLMGASKRFK HHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAVSDLSLAFPQFIATAAALIVDWVEVSYDDGLKEAEEKAKELKEMYDKVVDELAGKPPS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC ITNRYVYNQWWKYKTRVEECAKEIILNNPDITYEELLNEVDQCAVLE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA