Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
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Accession | NC_003106 |
Length | 2,694,756 |
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The map label for this gene is 15921572
Identifier: 15921572
GI number: 15921572
Start: 1307123
End: 1307596
Strand: Direct
Name: 15921572
Synonym: ST1303
Alternate gene names: NA
Gene position: 1307123-1307596 (Clockwise)
Preceding gene: 15921567
Following gene: 15921573
Centisome position: 48.51
GC content: 38.82
Gene sequence:
>474_bases ATGTCGTTAGAGGAAATAATAAAAAAGCTAGAGGAGAGAGGAGTTGATGTTACTGAGGCTTTACTAGATATTTTAAGTAG GGAAGACCCTAATGATAGTAGTAAGGAAAGAATAAGTTTAGCTGAAAAGTATATGCAGGAAAGCAAAGAGTATGCTGAAA AAGGAGACGCAGTTCAAGCGTCAGAGAAGGCTTATAAAGTTGTCGAAGAAGTCGTTAAGGCGTTGGCGGAAAAATTTAAG ACCGAGGAATACCAGGAGTTCTTGAAAGAAGGTAGATGGTACATCTATTTGTTAGGCAAGGCCAGCAAGACGCTTTCTAA AAATCTGGGTTATTGGGTTTTAGACGGCTGGAATGCTGGTTACGATTTGCATGTATGGGGATTCCACGAGAGAAAATATT CCGTTGAGGACGTTAAAGTCTCCCTAAAAAGGGTAGAAGAAATGCTTATTGAAGCAAAGAAGTTATTTGTTTAA
Upstream 100 bases:
>100_bases ACTCGTAATACAAGAATTTATACCCTAATGACAACACTATGTCCATACTCCGATAGATGAAGAAAAAGTTAATATTGAAG AGATAAAAAATGAAAATAGA
Downstream 100 bases:
>100_bases TATACATTCCTCAATGAACGCTATAACATAAGAGTACTCCCTAGCCTCAGACTCCGGGTCTACTATTGAATGACCTGACT CGTTAACGAAGAGCAGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: PaREP8 Domain-Containing Protein; PaREP1 Protein; PaREP1 Domain Containing Protein; PaREP1 Domain-Containing Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSLEEIIKKLEERGVDVTEALLDILSREDPNDSSKERISLAEKYMQESKEYAEKGDAVQASEKAYKVVEEVVKALAEKFK TEEYQEFLKEGRWYIYLLGKASKTLSKNLGYWVLDGWNAGYDLHVWGFHERKYSVEDVKVSLKRVEEMLIEAKKLFV
Sequences:
>Translated_157_residues MSLEEIIKKLEERGVDVTEALLDILSREDPNDSSKERISLAEKYMQESKEYAEKGDAVQASEKAYKVVEEVVKALAEKFK TEEYQEFLKEGRWYIYLLGKASKTLSKNLGYWVLDGWNAGYDLHVWGFHERKYSVEDVKVSLKRVEEMLIEAKKLFV >Mature_156_residues SLEEIIKKLEERGVDVTEALLDILSREDPNDSSKERISLAEKYMQESKEYAEKGDAVQASEKAYKVVEEVVKALAEKFKT EEYQEFLKEGRWYIYLLGKASKTLSKNLGYWVLDGWNAGYDLHVWGFHERKYSVEDVKVSLKRVEEMLIEAKKLFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18322; Mature: 18191
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEEIIKKLEERGVDVTEALLDILSREDPNDSSKERISLAEKYMQESKEYAEKGDAVQA CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH SEKAYKVVEEVVKALAEKFKTEEYQEFLKEGRWYIYLLGKASKTLSKNLGYWVLDGWNAG HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEECCCHHHHHHCCCEEEEECCCCC YDLHVWGFHERKYSVEDVKVSLKRVEEMLIEAKKLFV CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLEEIIKKLEERGVDVTEALLDILSREDPNDSSKERISLAEKYMQESKEYAEKGDAVQA CHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH SEKAYKVVEEVVKALAEKFKTEEYQEFLKEGRWYIYLLGKASKTLSKNLGYWVLDGWNAG HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEECCCHHHHHHCCCEEEEECCCCC YDLHVWGFHERKYSVEDVKVSLKRVEEMLIEAKKLFV CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA