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The map label for this gene is 15921564

Identifier: 15921564

GI number: 15921564

Start: 1298353

End: 1299276

Strand: Direct

Name: 15921564

Synonym: ST1298

Alternate gene names: NA

Gene position: 1298353-1299276 (Clockwise)

Preceding gene: 60623872

Following gene: 15921565

Centisome position: 48.18

GC content: 26.84

Gene sequence:

>924_bases
ATGGAAATAGATAAGGCAATAAAAGAGCATAAAATAGAAGATTTATCACAAATAAAAGAAGTTCTATATAATATGGGAGA
AATAAGCCTTACTTTATATAAGAATTATTTTAATGACGAGTTTCAAAATAGAAGTTGTTACATTTGTGACAATAGAATAA
ATGAATTTAAAGAAAATTTCCTTAAGAAAGCATTAGAAAAGATAGGAAATAATAAGACTTTTGTATTAGGTGTTAAACTC
ACTGATGAATTAAAGAATAGAGAAGAAAAATTTATGGTGGAAAATCAATTATTCTATTATGAAAGTATAAAAAATGAAAT
AAAAAGAGACGTAGGAAAAAAATTGGCTAATATGGGTTTTATACCAGAATTTGATAATCCTCAAGTAGAACTTGTCTATG
ATATGGAATATGATACTGTAATAATATTTACTAAGTCTAAAAAGTACTTAGCATTTTATAATAGACTTAGTAGAGGTATA
CCTATATCTAGTTGGGTTTCTAAAGGAGGAGAATCTTTAGAGAGTCTATTATCTACGCAAGTTGTTGCTCCTTATTCTGA
GGCTTCAGAGTACAGAATAATTGATGACTATCCGCTTATAATAGAAAATATAACTGAGAAAGAGATAAACTTGCAAGGAT
TCCATATTACTGTAGTATCAAAAATTGCGGGAAAAGAGCTATCAACAATTTTTACTATAAAGCCTACTAGACGTCTATAT
AGAGTAACAGTTTATTCAGATGAGGAAATTAAGGAGGGAATTAAAATTTATGATAAAATTTATGATATATTTATAGAGGC
AAAAGATTTTAAAGAACTAAGAGAGAAGATAAAAAATTACCAGCTTATTTCCATAGATTTAATATCTACTGTAGGCAAAA
GTAAACTAGTAGCCGACACTTATATTAAAAAGAATTTTTCATAA

Upstream 100 bases:

>100_bases
GTATCCTCTTTGTGATAGTTGTCTAGGAAGATGTTTTGCAAGGCTCAGTTTAGGTCATAGTAATGAAGAAAGAGGTAAGG
CAATAAAGATATTATTATTA

Downstream 100 bases:

>100_bases
TTAATGAGATGAATGTCGATATAAACGGTAAAAGAGTCTTAATAACTGCATCCACTGAAGGAATAGGTAAAGGTCTAGCA
AGAACCCTATCACGAGAAGG

Product: putative pseudouridylate synthase

Products: NA

Alternate protein names: THUMP Domain Protein

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MEIDKAIKEHKIEDLSQIKEVLYNMGEISLTLYKNYFNDEFQNRSCYICDNRINEFKENFLKKALEKIGNNKTFVLGVKL
TDELKNREEKFMVENQLFYYESIKNEIKRDVGKKLANMGFIPEFDNPQVELVYDMEYDTVIIFTKSKKYLAFYNRLSRGI
PISSWVSKGGESLESLLSTQVVAPYSEASEYRIIDDYPLIIENITEKEINLQGFHITVVSKIAGKELSTIFTIKPTRRLY
RVTVYSDEEIKEGIKIYDKIYDIFIEAKDFKELREKIKNYQLISIDLISTVGKSKLVADTYIKKNFS

Sequences:

>Translated_307_residues
MEIDKAIKEHKIEDLSQIKEVLYNMGEISLTLYKNYFNDEFQNRSCYICDNRINEFKENFLKKALEKIGNNKTFVLGVKL
TDELKNREEKFMVENQLFYYESIKNEIKRDVGKKLANMGFIPEFDNPQVELVYDMEYDTVIIFTKSKKYLAFYNRLSRGI
PISSWVSKGGESLESLLSTQVVAPYSEASEYRIIDDYPLIIENITEKEINLQGFHITVVSKIAGKELSTIFTIKPTRRLY
RVTVYSDEEIKEGIKIYDKIYDIFIEAKDFKELREKIKNYQLISIDLISTVGKSKLVADTYIKKNFS
>Mature_307_residues
MEIDKAIKEHKIEDLSQIKEVLYNMGEISLTLYKNYFNDEFQNRSCYICDNRINEFKENFLKKALEKIGNNKTFVLGVKL
TDELKNREEKFMVENQLFYYESIKNEIKRDVGKKLANMGFIPEFDNPQVELVYDMEYDTVIIFTKSKKYLAFYNRLSRGI
PISSWVSKGGESLESLLSTQVVAPYSEASEYRIIDDYPLIIENITEKEINLQGFHITVVSKIAGKELSTIFTIKPTRRLY
RVTVYSDEEIKEGIKIYDKIYDIFIEAKDFKELREKIKNYQLISIDLISTVGKSKLVADTYIKKNFS

Specific function: Unknown

COG id: COG1258

COG function: function code J; Predicted pseudouridylate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36021; Mature: 36021

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIDKAIKEHKIEDLSQIKEVLYNMGEISLTLYKNYFNDEFQNRSCYICDNRINEFKENF
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCEEEEECHHHHHHHHHH
LKKALEKIGNNKTFVLGVKLTDELKNREEKFMVENQLFYYESIKNEIKRDVGKKLANMGF
HHHHHHHHCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPEFDNPQVELVYDMEYDTVIIFTKSKKYLAFYNRLSRGIPISSWVSKGGESLESLLSTQ
CCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHH
VVAPYSEASEYRIIDDYPLIIENITEKEINLQGFHITVVSKIAGKELSTIFTIKPTRRLY
HCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCEEEEEEEHHHCCCCEEEEEEEECCCEEE
RVTVYSDEEIKEGIKIYDKIYDIFIEAKDFKELREKIKNYQLISIDLISTVGKSKLVADT
EEEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEHHHHHCCCCHHHHHH
YIKKNFS
HHHCCCC
>Mature Secondary Structure
MEIDKAIKEHKIEDLSQIKEVLYNMGEISLTLYKNYFNDEFQNRSCYICDNRINEFKENF
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCEEEEECHHHHHHHHHH
LKKALEKIGNNKTFVLGVKLTDELKNREEKFMVENQLFYYESIKNEIKRDVGKKLANMGF
HHHHHHHHCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPEFDNPQVELVYDMEYDTVIIFTKSKKYLAFYNRLSRGIPISSWVSKGGESLESLLSTQ
CCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHH
VVAPYSEASEYRIIDDYPLIIENITEKEINLQGFHITVVSKIAGKELSTIFTIKPTRRLY
HCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCEEEEEEEHHHCCCCEEEEEEEECCCEEE
RVTVYSDEEIKEGIKIYDKIYDIFIEAKDFKELREKIKNYQLISIDLISTVGKSKLVADT
EEEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEHHHHHCCCCHHHHHH
YIKKNFS
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA