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The map label for this gene is rpl24e

Identifier: 15920471

GI number: 15920471

Start: 299185

End: 299370

Strand: Reverse

Name: rpl24e

Synonym: STS039

Alternate gene names: 15920471

Gene position: 299370-299185 (Counterclockwise)

Preceding gene: 15920478

Following gene: 15920470

Centisome position: 11.11

GC content: 31.72

Gene sequence:

>186_bases
ATGCCCTCAATTAAACAGTGCAGTTTCTGTGGAAAAGAAATACCGCCAGCAACTGGTTTAATGTATATAAGAAATGATGG
TAGTATATTATGGTTCTGTTCAAATAAATGTAAAAAATCAATGTTGAAGCTACATAGAGATCCTAAAAAGTTGAAATGGA
CAAAATCATATATAGGTGGTAAGTGA

Upstream 100 bases:

>100_bases
AGACTGAGCTTGTGATTTTTCTTTTTCGCTCATTTTCTTATTCCCTTAGTAATCAAAAAACCAATTCACTTAAATACTTC
ACTCTCTGTATTATCATGAG

Downstream 100 bases:

>100_bases
TGAGTATCCAAAGAACTTTTGTTATGATAAAACCAGATGGTGTAAGAAGAAATCTTATTGGCGAAATAATTTCTAGATTT
GAAAAAAGAGGTCTTAAAAT

Product: 50S ribosomal protein L24e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MPSIKQCSFCGKEIPPATGLMYIRNDGSILWFCSNKCKKSMLKLHRDPKKLKWTKSYIGGK

Sequences:

>Translated_61_residues
MPSIKQCSFCGKEIPPATGLMYIRNDGSILWFCSNKCKKSMLKLHRDPKKLKWTKSYIGGK
>Mature_60_residues
PSIKQCSFCGKEIPPATGLMYIRNDGSILWFCSNKCKKSMLKLHRDPKKLKWTKSYIGGK

Specific function: Binds to the 23S rRNA

COG id: COG2075

COG function: function code J; Ribosomal protein L24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24E_SULTO (Q975Z9)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376140.1
- ProteinModelPortal:   Q975Z9
- SMR:   Q975Z9
- GeneID:   1458183
- GenomeReviews:   BA000023_GR
- KEGG:   sto:STS039
- NMPDR:   fig|273063.1.peg.308
- HOGENOM:   HBG499845
- OMA:   GTGKMFV
- ProtClustDB:   PRK00807
- BioCyc:   STOK273063:STS039-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00773
- InterPro:   IPR000988
- InterPro:   IPR011017
- Gene3D:   G3DSA:2.30.170.20
- PANTHER:   PTHR10792
- SMART:   SM00746

Pfam domain/function: PF01246 Ribosomal_L24e

EC number: NA

Molecular weight: Translated: 6993; Mature: 6862

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS01073 RIBOSOMAL_L24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSIKQCSFCGKEIPPATGLMYIRNDGSILWFCSNKCKKSMLKLHRDPKKLKWTKSYIGG
CCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCEEEHHHCCC
K
C
>Mature Secondary Structure 
PSIKQCSFCGKEIPPATGLMYIRNDGSILWFCSNKCKKSMLKLHRDPKKLKWTKSYIGG
CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCEEEHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479