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The map label for this gene is rps8e

Identifier: 15920366

GI number: 15920366

Start: 212096

End: 212482

Strand: Reverse

Name: rps8e

Synonym: ST0188

Alternate gene names: 15920366

Gene position: 212482-212096 (Counterclockwise)

Preceding gene: 15920367

Following gene: 15920363

Centisome position: 7.89

GC content: 32.3

Gene sequence:

>387_bases
ATGGGATATTTTCAAGGTAATGATTTTAGGAAAATAACTGGTGGTAAAAAAGGAAAACATAGAGATAAAAGGAAGTTTGA
ATTAGGTTCTCCTCCTACTGAAACAAAACTTAGTACTGAGGAGTTAATAGAAAAAGAAAGAGGTATGGGAGGAAATATAA
AAATAAGAGTGAAATATGCCACGTTTGCAAACATATATGACCCTCAAGAAAAGGTAAGCAAGAAAGCAAAAATATTATCA
GTTATAGAAACTCCAGCAAATAAGGAGTATGCTAGAAGAGGAATAATTGTAAAAGGATCAATAATTCAAACAGAATTGGG
AAAAGCAAAGGTAACTTCAAGGCCAGGTCAAGACGGAACAATAAATGCTATACTGATTAAAGAATGA

Upstream 100 bases:

>100_bases
TTAGAAAGATAGACTTATGGAGAGCAATAAGATCTTATCAAAAGAGGAAAAGAAATTTCGGTGCTTAAATTTATAAGCTA
CCTCCTTAAATAAGTTTCGT

Downstream 100 bases:

>100_bases
GCTTAAGAGACTATAAAGGGGAAAAAGTAGCCATATGGTTAGCTTATTTTTTAGCTAGTAGTAGGGGTAAAGGAAGAAAA
ATTAGAAAAATTGGAGAAAA

Product: 30S ribosomal protein S8e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MGYFQGNDFRKITGGKKGKHRDKRKFELGSPPTETKLSTEELIEKERGMGGNIKIRVKYATFANIYDPQEKVSKKAKILS
VIETPANKEYARRGIIVKGSIIQTELGKAKVTSRPGQDGTINAILIKE

Sequences:

>Translated_128_residues
MGYFQGNDFRKITGGKKGKHRDKRKFELGSPPTETKLSTEELIEKERGMGGNIKIRVKYATFANIYDPQEKVSKKAKILS
VIETPANKEYARRGIIVKGSIIQTELGKAKVTSRPGQDGTINAILIKE
>Mature_127_residues
GYFQGNDFRKITGGKKGKHRDKRKFELGSPPTETKLSTEELIEKERGMGGNIKIRVKYATFANIYDPQEKVSKKAKILSV
IETPANKEYARRGIIVKGSIIQTELGKAKVTSRPGQDGTINAILIKE

Specific function: Unknown

COG id: COG2007

COG function: function code J; Ribosomal protein S8E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S8e family

Homologues:

Organism=Saccharomyces cerevisiae, GI6320949, Length=96, Percent_Identity=37.5, Blast_Score=61, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6319399, Length=96, Percent_Identity=37.5, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS8E_SULTO (Q976K3)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376035.1
- ProteinModelPortal:   Q976K3
- GeneID:   1458072
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0188
- NMPDR:   fig|273063.1.peg.203
- HOGENOM:   HBG745393
- OMA:   GGNRKVR
- ProtClustDB:   PRK04049
- BioCyc:   STOK273063:ST0188-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00029
- InterPro:   IPR020919
- InterPro:   IPR001047
- InterPro:   IPR022309
- InterPro:   IPR018283
- PANTHER:   PTHR10394:SF2
- TIGRFAMs:   TIGR00307

Pfam domain/function: PF01201 Ribosomal_S8e

EC number: NA

Molecular weight: Translated: 14281; Mature: 14150

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS01193 RIBOSOMAL_S8E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYFQGNDFRKITGGKKGKHRDKRKFELGSPPTETKLSTEELIEKERGMGGNIKIRVKYA
CCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEE
TFANIYDPQEKVSKKAKILSVIETPANKEYARRGIIVKGSIIQTELGKAKVTSRPGQDGT
EECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCEEEECCEEECCCCCEEECCCCCCCCC
INAILIKE
EEEEEEEC
>Mature Secondary Structure 
GYFQGNDFRKITGGKKGKHRDKRKFELGSPPTETKLSTEELIEKERGMGGNIKIRVKYA
CCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEE
TFANIYDPQEKVSKKAKILSVIETPANKEYARRGIIVKGSIIQTELGKAKVTSRPGQDGT
EECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCEEEECCEEECCCCCEEECCCCCCCCC
INAILIKE
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479