| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920198
Identifier: 15920198
GI number: 15920198
Start: 39953
End: 40267
Strand: Reverse
Name: 15920198
Synonym: ST0025
Alternate gene names: NA
Gene position: 40267-39953 (Counterclockwise)
Preceding gene: 15920199
Following gene: 15920197
Centisome position: 1.49
GC content: 39.05
Gene sequence:
>315_bases ATGAGTATAGGCCCTTTATGGCGAAGTGAAATGCTGTATATAGTGTTTTATGATATAAGTGATGACGGGATGAGAAATAG AGTAGCTGATGTACTAAAGAAAAAGGGTTTGGTTAGGGTACAGTATAGTGTGTTCATTGGGGATCTGAACTCAGCAAGGT TAAAAGACGTTGTCGCTTCGCTTAGAGTCCTCTATAGGTCGAATAAGGAGGGAAGGTTTTCGGTAATGATCTTACCGGTG ACACAAGCAATGTTTAATCAGAGGATTATGATCGGAGATGAGTTTAAGGAAAATGAGGATAAGATAATCTGGTAA
Upstream 100 bases:
>100_bases AAGTTAAAAGACTTAAAAGTGATTTATTCCACCTTCGTTTTTGATGAGGACGAAATATACACCCAAGCTAGGAGGCTTGT AAACTCAATACTCCACGGGG
Downstream 100 bases:
>100_bases CTTCTATCTATTGTCGTAATAGTCTACTTATCACCCTTTTTCCCTTAACTATCTATTTATCAATTCCTTTTGAGAATCAT CGGATCAATTAATTTTAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSIGPLWRSEMLYIVFYDISDDGMRNRVADVLKKKGLVRVQYSVFIGDLNSARLKDVVASLRVLYRSNKEGRFSVMILPV TQAMFNQRIMIGDEFKENEDKIIW
Sequences:
>Translated_104_residues MSIGPLWRSEMLYIVFYDISDDGMRNRVADVLKKKGLVRVQYSVFIGDLNSARLKDVVASLRVLYRSNKEGRFSVMILPV TQAMFNQRIMIGDEFKENEDKIIW >Mature_103_residues SIGPLWRSEMLYIVFYDISDDGMRNRVADVLKKKGLVRVQYSVFIGDLNSARLKDVVASLRVLYRSNKEGRFSVMILPVT QAMFNQRIMIGDEFKENEDKIIW
Specific function: Unknown
COG id: COG1343
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12136; Mature: 12005
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGPLWRSEMLYIVFYDISDDGMRNRVADVLKKKGLVRVQYSVFIGDLNSARLKDVVAS CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCEEEEEEEEEEECCCCHHHHHHHHH LRVLYRSNKEGRFSVMILPVTQAMFNQRIMIGDEFKENEDKIIW HHHHHCCCCCCEEEEEEEECCHHHHCCEEEECCCCCCCCCCCCC >Mature Secondary Structure SIGPLWRSEMLYIVFYDISDDGMRNRVADVLKKKGLVRVQYSVFIGDLNSARLKDVVAS CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCEEEEEEEEEEECCCCHHHHHHHHH LRVLYRSNKEGRFSVMILPVTQAMFNQRIMIGDEFKENEDKIIW HHHHHCCCCCCEEEEEEEECCHHHHCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA