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The map label for this gene is 15920199

Identifier: 15920199

GI number: 15920199

Start: 40239

End: 41135

Strand: Reverse

Name: 15920199

Synonym: ST0026

Alternate gene names: NA

Gene position: 41135-40239 (Counterclockwise)

Preceding gene: 15920209

Following gene: 15920198

Centisome position: 1.53

GC content: 39.46

Gene sequence:

>897_bases
GTGGAAAAGAGAATAGCATTTGTAAAAGATTGGGGAGCTTATCTTAGAGTGAATAAGGGGAAGATTGAGTGTGTAGCAAA
AAACGAGGTGAAGTGGAGTCTTTCCCCCGCTGAAGTTTCTTCAATAATCTTCCTCGTAAACTCTTCCCTTTCAACCGAAG
TAATCAGATTAGCAAACGAATTTGGGATAGAAATGGTCTTCTTTCACGACAGCGAGCCGATAGCTAGAGTAATTACTACA
AAATACGGCGGATCAATGAAGGTCTGGATTAAACAGATAAGAGAGGCTAAAAAGAACCCGGAAAAATACGCTAAGCAGTT
CGTTTACGGTAAGTTACACAATCAGTGGGTTACGATCCACTATTACGAGAAAAAGTACGGGTTTAAATTAGGTGGAGACG
AACTATACGGAATTGCAAAAGAAGTACTTACGGAAAACAATATAGAACAAATAATGGTTAAAGAAGCTGAAGGGGCTAAA
ATCTATTGGAAAGGTGTAAAATATCTTTTACCGAAAGAGTTGGGATTTAAGGGTAGGAAGAAAAGAGGAGATAACCTTGA
TCCGTTTAATAAAGCGTTAAACATAGGCTACGGGATGTTGAGGAAAAGCGTGTGGGGAGCAGTAATTTCAGCTGGTCTAA
ATCCCTATATAGGATTCCTCCATAAGTTCAGATCTGGAAGACTATCGTTAGTTTTCGATTTAATGGAGGAGTTCAGATCG
CCTTTTGTAGACAGGCCATTGATAGGACTTGCGAGAGAAAATTATGAGAAGTTAAAAGACTTAAAAGTGATTTATTCCAC
CTTCGTTTTTGATGAGGACGAAATATACACCCAAGCTAGGAGGCTTGTAAACTCAATACTCCACGGGGATGAGTATAGGC
CCTTTATGGCGAAGTGA

Upstream 100 bases:

>100_bases
AGGAAATCCCTTCATCCTTTTCGAGAGGAGCTGAATCTCTGAAAGAGTAAAGAACACAAAATTAGTTAGATTTTTGATTT
AAAAAATTGTATTACTAAAT

Downstream 100 bases:

>100_bases
AATGCTGTATATAGTGTTTTATGATATAAGTGATGACGGGATGAGAAATAGAGTAGCTGATGTACTAAAGAAAAAGGGTT
TGGTTAGGGTACAGTATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Protein; CRISPR-Associated Protein Cas1 Family; CRISPR-Associated Cas1/Cas4 Family Protein; Cas1 Family CRISPR-Associated Protein; Crispr-Associated A; CRISPR-Associated ; CRISPR-Associated DNA Polymerase

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MEKRIAFVKDWGAYLRVNKGKIECVAKNEVKWSLSPAEVSSIIFLVNSSLSTEVIRLANEFGIEMVFFHDSEPIARVITT
KYGGSMKVWIKQIREAKKNPEKYAKQFVYGKLHNQWVTIHYYEKKYGFKLGGDELYGIAKEVLTENNIEQIMVKEAEGAK
IYWKGVKYLLPKELGFKGRKKRGDNLDPFNKALNIGYGMLRKSVWGAVISAGLNPYIGFLHKFRSGRLSLVFDLMEEFRS
PFVDRPLIGLARENYEKLKDLKVIYSTFVFDEDEIYTQARRLVNSILHGDEYRPFMAK

Sequences:

>Translated_298_residues
MEKRIAFVKDWGAYLRVNKGKIECVAKNEVKWSLSPAEVSSIIFLVNSSLSTEVIRLANEFGIEMVFFHDSEPIARVITT
KYGGSMKVWIKQIREAKKNPEKYAKQFVYGKLHNQWVTIHYYEKKYGFKLGGDELYGIAKEVLTENNIEQIMVKEAEGAK
IYWKGVKYLLPKELGFKGRKKRGDNLDPFNKALNIGYGMLRKSVWGAVISAGLNPYIGFLHKFRSGRLSLVFDLMEEFRS
PFVDRPLIGLARENYEKLKDLKVIYSTFVFDEDEIYTQARRLVNSILHGDEYRPFMAK
>Mature_298_residues
MEKRIAFVKDWGAYLRVNKGKIECVAKNEVKWSLSPAEVSSIIFLVNSSLSTEVIRLANEFGIEMVFFHDSEPIARVITT
KYGGSMKVWIKQIREAKKNPEKYAKQFVYGKLHNQWVTIHYYEKKYGFKLGGDELYGIAKEVLTENNIEQIMVKEAEGAK
IYWKGVKYLLPKELGFKGRKKRGDNLDPFNKALNIGYGMLRKSVWGAVISAGLNPYIGFLHKFRSGRLSLVFDLMEEFRS
PFVDRPLIGLARENYEKLKDLKVIYSTFVFDEDEIYTQARRLVNSILHGDEYRPFMAK

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34525; Mature: 34525

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRIAFVKDWGAYLRVNKGKIECVAKNEVKWSLSPAEVSSIIFLVNSSLSTEVIRLANE
CCCCEEEEECCCCEEEECCCEEEEEEECCEEEEECHHHHHHEEEEECCCHHHHHHHHHHH
FGIEMVFFHDSEPIARVITTKYGGSMKVWIKQIREAKKNPEKYAKQFVYGKLHNQWVTIH
HCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEE
YYEKKYGFKLGGDELYGIAKEVLTENNIEQIMVKEAEGAKIYWKGVKYLLPKELGFKGRK
EEECCCCCEECCHHHHHHHHHHHCCCCHHHHEEECCCCCEEEECCHHHHCCHHCCCCCCC
KRGDNLDPFNKALNIGYGMLRKSVWGAVISAGLNPYIGFLHKFRSGRLSLVFDLMEEFRS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHC
PFVDRPLIGLARENYEKLKDLKVIYSTFVFDEDEIYTQARRLVNSILHGDEYRPFMAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEKRIAFVKDWGAYLRVNKGKIECVAKNEVKWSLSPAEVSSIIFLVNSSLSTEVIRLANE
CCCCEEEEECCCCEEEECCCEEEEEEECCEEEEECHHHHHHEEEEECCCHHHHHHHHHHH
FGIEMVFFHDSEPIARVITTKYGGSMKVWIKQIREAKKNPEKYAKQFVYGKLHNQWVTIH
HCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEE
YYEKKYGFKLGGDELYGIAKEVLTENNIEQIMVKEAEGAKIYWKGVKYLLPKELGFKGRK
EEECCCCCEECCHHHHHHHHHHHCCCCHHHHEEECCCCCEEEECCHHHHCCHHCCCCCCC
KRGDNLDPFNKALNIGYGMLRKSVWGAVISAGLNPYIGFLHKFRSGRLSLVFDLMEEFRS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHC
PFVDRPLIGLARENYEKLKDLKVIYSTFVFDEDEIYTQARRLVNSILHGDEYRPFMAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA