Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 17935859
Identifier: 17935859
GI number: 17935859
Start: 1939546
End: 1939908
Strand: Direct
Name: 17935859
Synonym: Atu1970
Alternate gene names: NA
Gene position: 1939546-1939908 (Clockwise)
Preceding gene: 15889260
Following gene: 159184997
Centisome position: 68.26
GC content: 55.1
Gene sequence:
>363_bases TTGGTTACAGCATCCGTATCGCAGCATTCTCACCGCGGCCCGCAAGCTGCGGCGCAATTATCGAAACAGCCAATAGACAA CGCCGAGTATCACCGTCCACATCAGCAGCGATATGGCCAGCACGGTGAGATAATTTCGAAATCGTCTGGTCATCCGCCCA CATTGCCGACCAGCCGCATCGGACAGCCGCTGTCGTTTAAATTGCTGGATGCGGATCGAGCCGCAGGATCAACTCTTTCT ATCAAGAGACTGAATCCTAAGCCATTCGCAGATTTTACCCGCCCGAAAACGGGGTTGCCCATGCCGTGGTTTCCGGCCCA CGAGAAACCCGCTCATCCGCGATCAGCTCCTGATTACGGATGA
Upstream 100 bases:
>100_bases ATTGCACCGAACCATAGGGACACGGCGGCAAAGCCGAAATGAGGCGGCCACCCGTCACAGGTCAGATTTTTGCGGATACG CGGCGGAAGTATCGTCAGAG
Downstream 100 bases:
>100_bases GCAAGATATCCTCATGTTCAAGCTATGCCGGCAAAACCTCATGCGCGAATAATCGCAGCCGATTCGGCACATGCGTTAGC CAAGGCCGTTTCGGAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MVTASVSQHSHRGPQAAAQLSKQPIDNAEYHRPHQQRYGQHGEIISKSSGHPPTLPTSRIGQPLSFKLLDADRAAGSTLS IKRLNPKPFADFTRPKTGLPMPWFPAHEKPAHPRSAPDYG
Sequences:
>Translated_120_residues MVTASVSQHSHRGPQAAAQLSKQPIDNAEYHRPHQQRYGQHGEIISKSSGHPPTLPTSRIGQPLSFKLLDADRAAGSTLS IKRLNPKPFADFTRPKTGLPMPWFPAHEKPAHPRSAPDYG >Mature_120_residues MVTASVSQHSHRGPQAAAQLSKQPIDNAEYHRPHQQRYGQHGEIISKSSGHPPTLPTSRIGQPLSFKLLDADRAAGSTLS IKRLNPKPFADFTRPKTGLPMPWFPAHEKPAHPRSAPDYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13189; Mature: 13189
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTASVSQHSHRGPQAAAQLSKQPIDNAEYHRPHQQRYGQHGEIISKSSGHPPTLPTSRI CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCHHHC GQPLSFKLLDADRAAGSTLSIKRLNPKPFADFTRPKTGLPMPWFPAHEKPAHPRSAPDYG CCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVTASVSQHSHRGPQAAAQLSKQPIDNAEYHRPHQQRYGQHGEIISKSSGHPPTLPTSRI CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCHHHC GQPLSFKLLDADRAAGSTLSIKRLNPKPFADFTRPKTGLPMPWFPAHEKPAHPRSAPDYG CCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA