Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184997
Identifier: 159184997
GI number: 159184997
Start: 1940824
End: 1941150
Strand: Direct
Name: 159184997
Synonym: Atu1972
Alternate gene names: NA
Gene position: 1940824-1941150 (Clockwise)
Preceding gene: 17935859
Following gene: 159184998
Centisome position: 68.3
GC content: 58.41
Gene sequence:
>327_bases ATGTTGAGGATGCCGAAGACCATCTCCGCGCTCGCTCTTGGCGTCGCGATATCTACCGCCGCCACCGTGCCTGCCCATGC GCTGAGCCTTATACAACCGGCCTATCAGCAGCAGGAACAGGCAGACGGCACAAATGGCAGCGGTAACACCGCATCCGCCT TTGCTGCGGGTAAGGGTGAAGAAGCCACCGCCAACGGTTATGCCCTGTCACAGACCGAAATCAACCACGTTAAATGGTGT GCAGCGCGATACGCCTCATACCATCCGACAGATAATAGTTTTATGGCAGCGGCAGGGGCGCGGGAGCAGTGTCGCTCTCC CCATTGA
Upstream 100 bases:
>100_bases CTCGCCTCGAGAATCACGTATTCGTATGCGGTCAACCCTTCTTCGGAACGAATTTCCTAAGTTTTCGTTAGCATCTCGAA CGAATAACGAGGATTTATCG
Downstream 100 bases:
>100_bases TCGATTTGCCAATAAACCGGCCGCGGCATGCGGTGCCGCAGCCGATAGGATAAATTTACCTTAAATTCTACTGATTTGAA CCTTTGTCCGCGGAGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MLRMPKTISALALGVAISTAATVPAHALSLIQPAYQQQEQADGTNGSGNTASAFAAGKGEEATANGYALSQTEINHVKWC AARYASYHPTDNSFMAAAGAREQCRSPH
Sequences:
>Translated_108_residues MLRMPKTISALALGVAISTAATVPAHALSLIQPAYQQQEQADGTNGSGNTASAFAAGKGEEATANGYALSQTEINHVKWC AARYASYHPTDNSFMAAAGAREQCRSPH >Mature_108_residues MLRMPKTISALALGVAISTAATVPAHALSLIQPAYQQQEQADGTNGSGNTASAFAAGKGEEATANGYALSQTEINHVKWC AARYASYHPTDNSFMAAAGAREQCRSPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11251; Mature: 11251
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRMPKTISALALGVAISTAATVPAHALSLIQPAYQQQEQADGTNGSGNTASAFAAGKGE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC EATANGYALSQTEINHVKWCAARYASYHPTDNSFMAAAGAREQCRSPH CCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHCCCCC >Mature Secondary Structure MLRMPKTISALALGVAISTAATVPAHALSLIQPAYQQQEQADGTNGSGNTASAFAAGKGE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC EATANGYALSQTEINHVKWCAARYASYHPTDNSFMAAAGAREQCRSPH CCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA