Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185431
Identifier: 159185431
GI number: 159185431
Start: 942423
End: 943076
Strand: Direct
Name: 159185431
Synonym: Atu8140
Alternate gene names: NA
Gene position: 942423-943076 (Clockwise)
Preceding gene: 159184549
Following gene: 159184550
Centisome position: 33.17
GC content: 65.14
Gene sequence:
>654_bases ATGGCCTATGACGAGGCGCGATTCTTCGCGTCGGTGCGAATTTCTATTTTCGGGGGCCGCCTGCGCGCCGCCCAGCTTGC CGGCACGAAAACGGTGCTTGCCGGTTTCGAAAAGGCGCTGCCGGGCGGCGATCCGCGCTGGCTGGCCTATATGCTGGCGA CGGCCTTTCACGAGACGGCGGCGACAATGCAGCCGGTGCGCGAGACATTGGCGGCAAGCGATGCCGAAGCGATCGTGAGA CTCGACCGCGCCTTTGCGGCGGGCAGGCTGCCCATGGTGCGCAAACCCTATTGGCGGCTCGATGCCGAAGGAAAAAGCTG GCTGGGGCGCGGTTTCGTGCAACTGACCCATCGCCGCAACTACGAAGCCATGTCGGCGCTGACCGGCATCGACCTGGTGA AGCGCCCGGAGCGGGCCATGGAGGCGGAAGTGGCAACGGCGATCCTGATTCACGGCATGGTGGCCGGCAGCTTCACCGGC CGCAGCCTTGCCGATTTCTTCAGTGGCGAAGACGAGGATTGGGATGGCGCCCGCGCCATCATCAATGGCAGCGACCGGGC GCGGCTCATAGGCAGCTACGGACGGGCATTTCATCGCGCCCTTGTTATGGCGCCGATTGTCACGGCGCGGATTGAACCGG CGTCGGCCAGATGA
Upstream 100 bases:
>100_bases GGATTAAAATCGATTAAGGTTTTTTCAAATCGATTTAGTCCTGACGGCTGTCATGTGGAAAACCGGGCGCTTTGCCGCCC GTCACTTTCAGGAGCCTTCC
Downstream 100 bases:
>100_bases TAACCCGTTACACCGTGCCGCTGAGGCCGCTCTTGAACTTTGCATGACAGGTGACACCGTGATCCGCCATATCGTCTTTT TCACCGTTCCCGAGGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MAYDEARFFASVRISIFGGRLRAAQLAGTKTVLAGFEKALPGGDPRWLAYMLATAFHETAATMQPVRETLAASDAEAIVR LDRAFAAGRLPMVRKPYWRLDAEGKSWLGRGFVQLTHRRNYEAMSALTGIDLVKRPERAMEAEVATAILIHGMVAGSFTG RSLADFFSGEDEDWDGARAIINGSDRARLIGSYGRAFHRALVMAPIVTARIEPASAR
Sequences:
>Translated_217_residues MAYDEARFFASVRISIFGGRLRAAQLAGTKTVLAGFEKALPGGDPRWLAYMLATAFHETAATMQPVRETLAASDAEAIVR LDRAFAAGRLPMVRKPYWRLDAEGKSWLGRGFVQLTHRRNYEAMSALTGIDLVKRPERAMEAEVATAILIHGMVAGSFTG RSLADFFSGEDEDWDGARAIINGSDRARLIGSYGRAFHRALVMAPIVTARIEPASAR >Mature_216_residues AYDEARFFASVRISIFGGRLRAAQLAGTKTVLAGFEKALPGGDPRWLAYMLATAFHETAATMQPVRETLAASDAEAIVRL DRAFAAGRLPMVRKPYWRLDAEGKSWLGRGFVQLTHRRNYEAMSALTGIDLVKRPERAMEAEVATAILIHGMVAGSFTGR SLADFFSGEDEDWDGARAIINGSDRARLIGSYGRAFHRALVMAPIVTARIEPASAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23747; Mature: 23615
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYDEARFFASVRISIFGGRLRAAQLAGTKTVLAGFEKALPGGDPRWLAYMLATAFHETA CCCCHHHHHHHEEEEEECCCHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ATMQPVRETLAASDAEAIVRLDRAFAAGRLPMVRKPYWRLDAEGKSWLGRGFVQLTHRRN HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCC YEAMSALTGIDLVKRPERAMEAEVATAILIHGMVAGSFTGRSLADFFSGEDEDWDGARAI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEE INGSDRARLIGSYGRAFHRALVMAPIVTARIEPASAR ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AYDEARFFASVRISIFGGRLRAAQLAGTKTVLAGFEKALPGGDPRWLAYMLATAFHETA CCCHHHHHHHEEEEEECCCHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ATMQPVRETLAASDAEAIVRLDRAFAAGRLPMVRKPYWRLDAEGKSWLGRGFVQLTHRRN HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCC YEAMSALTGIDLVKRPERAMEAEVATAILIHGMVAGSFTGRSLADFFSGEDEDWDGARAI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEE INGSDRARLIGSYGRAFHRALVMAPIVTARIEPASAR ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA