Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185310
Identifier: 159185310
GI number: 159185310
Start: 2638879
End: 2640495
Strand: Direct
Name: 159185310
Synonym: Atu2656
Alternate gene names: NA
Gene position: 2638879-2640495 (Clockwise)
Preceding gene: 159185309
Following gene: 15889912
Centisome position: 92.87
GC content: 63.45
Gene sequence:
>1617_bases ATGATCAGAATTCTGACTTTCGCCGTTATCGTTCTGGCGCTTGGTTTCGGTTTCTCCTGGCTGGCGGACAGGCCAGGCGC GCTTTCCATCGTCTGGCAGGGCCAGCTGATCGAAATGAGCCTGATGGTCGCCGCCTCGATCATCGCGGCGCTGGTTGCCG CCGTCATGCTCATCTGGTGGGTAGTCAACGCCGTCTGGACCTCGCCCAATGCCGCTCGCCGCTATTTTCGCGCCCGCAAG CGTGACCGCGGTTATCAGGCCCTGTCCACCGGCCTCATCGCCGCCGGGGCCGGCAATGCCATTCTCGCCCGCAAGATGAC AGCCCGCACGCAGGGGTTGCTCAGCGCCGATCAGGAGCCGCTGATCCACCTGCTCGATGCGCAGGCCGATCTCATCGAAG GCAAATATGACGAGGCGCGCCGCAAGTTCGAGGCCATGGCCCGCGACCCGGAAACCCGAGAACTTGGCCTTCGCGGCCTT TATATCGAGGCGCGCCGGCAGGGCGCTTATGAAGCCGCCCAGCAATATGCCGAGGACGCAGCGGAAAAGGCCCCCTATCT GCCGTGGGCTGCGCAGGCGACGCTGGAAAACCGTTGTCGCAACGGACAATGGGACGATGCCATCCGCCTGCTCGACCAGC AGAAGGCGGCAAGCGTGATCGAGCGTGGTGAAGCGGAACGGCTGAAAGCCGTGCTTCTCACCGCCAAGGCCGGCGAAAAG CTGGAAAGCGATCCGGTGAGCGCGCGAGAGGATGCCAAACATGCCCTCAAGCTCGCAAAAGGCCTCGTTCCGGCGGCACT GATCGCGGCAAAATCCTATCTGCGTGAAGACAATCTGCGCAAGGCGGCCACGGTTCTGGAACCCGTGTGGAAGAACGAAC CGCATCCGCAGATCGCCCAGCTTTATGTTCGCGCCCGCAGCGGCGATACCGCCATAGACCGGCTGAAACGTGCCGAACGG CTGGAAAGCCTGAAACCCAACAATATCGAATCGCTGTTCGCCGTGGCGCAGGCGGCGCTCGACGCCAAGGAATTCGCCAA GGCGCGGGCCAAGGCCGAGGCCGCCGCGCGGATCGAGCCACGCGAAAGCATCTTCCTGCTGATGGCCGACATCGAGGAGG CCGAAACCGGTGATCAGGGCCGGGTGCGCTACTGGATGGCACAGGCGCTGCGCGCGCCGCGTGATCCAGCCTGGGTGGCC GATGGCATCGTTTCGGAAAAATGGTTGCCGGTGTCGCCCGTCACTGGCCGTCTGGATGCCTTCGAATGGAAAGCGCCTTT TGGCCAGCTCGAAGGCCCCGTCGAAGACCTGACAATCGAAAACGCGATTGCCGCAGCGCCCGCAAGGGCCGAACCGGCTG TAAAGACAATCATTGTCGAAGCCGCCCCGGAGACGCGTGCGGAGCCGAAACCCGCCCCGGCCACGCCGATCGAGGTGAAG CCGATCGTATCTACCGCGAAGGAGAATAAGCCCGTCCCGATCGAAGCGCCGGTGGGAACCGATGCGTCGGATAAAAAAGC GGACGCCGTGCCGTTTTTCGGTGGCGCGCCGGATGATCCGGGTGTCAAGAAATCCGGCGCGGAAGCCGAACCCAAGACCC GGCTCAAACTCTTCTGA
Upstream 100 bases:
>100_bases GATTACAAGAAATCTCTGGATGCGCGTATCGAGGTCGAAAATCTGGTGGGCGGCACGTTGAACCGTGCCATCACCAGCAC CGGCAGGCAGGGGTAAGCGC
Downstream 100 bases:
>100_bases CCAACAGGCTATCGATGTTCCAGCAAATACAGTCGTTCCTTCAGAACCTCGTCGGCCCGAATGCGGGTGATTTCAGCCCT GATGATCTGAGGGTAGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: HemY Domain Protein; HemY-Like; HemY Protein; HemY N-Terminal Domain Protein; Hypthetical Protein Contains N-Terminal HemY Domain; Signal Peptide
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MIRILTFAVIVLALGFGFSWLADRPGALSIVWQGQLIEMSLMVAASIIAALVAAVMLIWWVVNAVWTSPNAARRYFRARK RDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEPLIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGL YIEARRQGAYEAAQQYAEDAAEKAPYLPWAAQATLENRCRNGQWDDAIRLLDQQKAASVIERGEAERLKAVLLTAKAGEK LESDPVSAREDAKHALKLAKGLVPAALIAAKSYLREDNLRKAATVLEPVWKNEPHPQIAQLYVRARSGDTAIDRLKRAER LESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIEPRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPAWVA DGIVSEKWLPVSPVTGRLDAFEWKAPFGQLEGPVEDLTIENAIAAAPARAEPAVKTIIVEAAPETRAEPKPAPATPIEVK PIVSTAKENKPVPIEAPVGTDASDKKADAVPFFGGAPDDPGVKKSGAEAEPKTRLKLF
Sequences:
>Translated_538_residues MIRILTFAVIVLALGFGFSWLADRPGALSIVWQGQLIEMSLMVAASIIAALVAAVMLIWWVVNAVWTSPNAARRYFRARK RDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEPLIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGL YIEARRQGAYEAAQQYAEDAAEKAPYLPWAAQATLENRCRNGQWDDAIRLLDQQKAASVIERGEAERLKAVLLTAKAGEK LESDPVSAREDAKHALKLAKGLVPAALIAAKSYLREDNLRKAATVLEPVWKNEPHPQIAQLYVRARSGDTAIDRLKRAER LESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIEPRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPAWVA DGIVSEKWLPVSPVTGRLDAFEWKAPFGQLEGPVEDLTIENAIAAAPARAEPAVKTIIVEAAPETRAEPKPAPATPIEVK PIVSTAKENKPVPIEAPVGTDASDKKADAVPFFGGAPDDPGVKKSGAEAEPKTRLKLF >Mature_538_residues MIRILTFAVIVLALGFGFSWLADRPGALSIVWQGQLIEMSLMVAASIIAALVAAVMLIWWVVNAVWTSPNAARRYFRARK RDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEPLIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGL YIEARRQGAYEAAQQYAEDAAEKAPYLPWAAQATLENRCRNGQWDDAIRLLDQQKAASVIERGEAERLKAVLLTAKAGEK LESDPVSAREDAKHALKLAKGLVPAALIAAKSYLREDNLRKAATVLEPVWKNEPHPQIAQLYVRARSGDTAIDRLKRAER LESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIEPRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPAWVA DGIVSEKWLPVSPVTGRLDAFEWKAPFGQLEGPVEDLTIENAIAAAPARAEPAVKTIIVEAAPETRAEPKPAPATPIEVK PIVSTAKENKPVPIEAPVGTDASDKKADAVPFFGGAPDDPGVKKSGAEAEPKTRLKLF
Specific function: Unknown
COG id: COG3898
COG function: function code S; Uncharacterized membrane-bound protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58684; Mature: 58684
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRILTFAVIVLALGFGFSWLADRPGALSIVWQGQLIEMSLMVAASIIAALVAAVMLIWW CHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH VVNAVWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEP HHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH LIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAYEAAQQYAEDA HHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCEEEEHHHHCCHHHHHHHHHHHH AEKAPYLPWAAQATLENRCRNGQWDDAIRLLDQQKAASVIERGEAERLKAVLLTAKAGEK HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC LESDPVSAREDAKHALKLAKGLVPAALIAAKSYLREDNLRKAATVLEPVWKNEPHPQIAQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIEP HHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPAWVADGIVSEKWLPVSPVTGRLDA CCCEEEEEEECHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHCHHCCCCCCCCCCCCCCCC FEWKAPFGQLEGPVEDLTIENAIAAAPARAEPAVKTIIVEAAPETRAEPKPAPATPIEVK EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEH PIVSTAKENKPVPIEAPVGTDASDKKADAVPFFGGAPDDPGVKKSGAEAEPKTRLKLF HHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRILTFAVIVLALGFGFSWLADRPGALSIVWQGQLIEMSLMVAASIIAALVAAVMLIWW CHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH VVNAVWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEP HHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH LIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAYEAAQQYAEDA HHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCEEEEHHHHCCHHHHHHHHHHHH AEKAPYLPWAAQATLENRCRNGQWDDAIRLLDQQKAASVIERGEAERLKAVLLTAKAGEK HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC LESDPVSAREDAKHALKLAKGLVPAALIAAKSYLREDNLRKAATVLEPVWKNEPHPQIAQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIEP HHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPAWVADGIVSEKWLPVSPVTGRLDA CCCEEEEEEECHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHCHHCCCCCCCCCCCCCCCC FEWKAPFGQLEGPVEDLTIENAIAAAPARAEPAVKTIIVEAAPETRAEPKPAPATPIEVK EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEH PIVSTAKENKPVPIEAPVGTDASDKKADAVPFFGGAPDDPGVKKSGAEAEPKTRLKLF HHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA