Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185309
Identifier: 159185309
GI number: 159185309
Start: 2637429
End: 2638874
Strand: Direct
Name: 159185309
Synonym: Atu2655
Alternate gene names: NA
Gene position: 2637429-2638874 (Clockwise)
Preceding gene: 15889909
Following gene: 159185310
Centisome position: 92.82
GC content: 62.17
Gene sequence:
>1446_bases ATGGTATCGGGAAAGCCGCCACGCCACTCCAAGTCCAAAGCCGAACCGGTCACAATCGACCTGGACGCGAAAGACGTGAA AGCAATTTCTGCCGAAGGAGACGCTGCCAGAACGGACGACAAGGCCGGTGACCAAACGCCGGTCGCTAAGGCAGAGCCGA GCGTTGAAGAAACAAAGCCCGCAGCAGCCGATCCCGCGCCCGTTTGGGACCAGCCGAAAAAATCCCCCCTCGAGCCAGAA CCGAATGTCGGCAAGACGGACTCATCGCTTGGCGCACCGAAGGCGGAAAGCCCTGCGGACAAGCCAAAAGAGCCCGTTTC ACCAGCTGCCGTACCGCCAAAAGCCGATGCCAAACCGGCAACTACCGCATACGGCGCGAGCGCCTCTTCGGCTGCCGCAG CCGCTTCGAAACCGGCCTTTGGCTCCACAGCCTCCACCAGCGCATCCGGCAGCGCCGCCGCAGCTGCAAAACCCTCACCG GCCACCGCCTCATCTGGACCGGCCAAACCCTCCACGCCACAACAGGTTGAACGTAAACAGGCCGCAACCTCGGGCTTGAT CGCCGCCGGCATCGTTGGCGGTCTCGTAGCGCTGGCCGCCGCTGGCAGCATGCAATATGCAGGCATCCTGCCTTCCTTTA CCGCGGGCGAGGCCGGAAGCGATGAAATCGCAGCCCTGAAATCCGATATCGGCGGCCTGCGGCAGCAGCTCGCCAATGCT CCGGCGGCAGACACATCGACGCTGGAACAGCGCATCGCAACGCTGGAAGCCGCGAAGAGTGAAGCGCCGCAGGTAGATGG GCTTTCGGAAAAAATCACTGCTCTGGAAGCTGCCCTGCAATCGGAGCGATCCGCGCAGGCCTCCGCCACATCAGAACTGA CGCGCCGCCTTGCGGATGTGGAAACCAAGCTCAACGAGCCACGCGACGATATCGAAGTCGCCCGTGCGATTGCATCGGCC GCACTGAAGGCAGCGATCGATCGCGGTGGACCGTTCCTCACAGAACTCGACACGCTCTCCAAGGTGACGCCTGACGATCC GGCCATCGCATCGCTGCAATCCTTCGCCGCCACGGGCGTGCCGTCGCGTTCGGAGCTGATGCAGAAATTCCCTGATGTCG CCAATGCGATGCTGTCGGCCATCAACCAGCCCGATCCCAATCAGGGCATCATGGAGCGCCTGACCGAAAGCGCCTTTTCG CTGGTGAAAGTTCGTCCGGTTGGAAATATAGAGGGTGAGACAGCCGACGCGATGATCGCGCGCATGGAGAACAAGCTGCG CAACGGCGATCTGCAGGGTGCCGCTCTTGAATGGAACGGGCTTCCCGAGGCGGCCAAGGCGGCATCCGCCGATTACAAGA AATCTCTGGATGCGCGTATCGAGGTCGAAAATCTGGTGGGCGGCACGTTGAACCGTGCCATCACCAGCACCGGCAGGCAG GGGTAA
Upstream 100 bases:
>100_bases CTTCTGCACCATAACTCTGGAACCTAATTCGACCTCACCTCTTTCCTTTGCCGCCGTCACTGACTAGGTTTAGAGTATTG CAGGCAGAAATGAGGTTGTC
Downstream 100 bases:
>100_bases GCGCATGATCAGAATTCTGACTTTCGCCGTTATCGTTCTGGCGCTTGGTTTCGGTTTCTCCTGGCTGGCGGACAGGCCAG GCGCGCTTTCCATCGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MVSGKPPRHSKSKAEPVTIDLDAKDVKAISAEGDAARTDDKAGDQTPVAKAEPSVEETKPAAADPAPVWDQPKKSPLEPE PNVGKTDSSLGAPKAESPADKPKEPVSPAAVPPKADAKPATTAYGASASSAAAAASKPAFGSTASTSASGSAAAAAKPSP ATASSGPAKPSTPQQVERKQAATSGLIAAGIVGGLVALAAAGSMQYAGILPSFTAGEAGSDEIAALKSDIGGLRQQLANA PAADTSTLEQRIATLEAAKSEAPQVDGLSEKITALEAALQSERSAQASATSELTRRLADVETKLNEPRDDIEVARAIASA ALKAAIDRGGPFLTELDTLSKVTPDDPAIASLQSFAATGVPSRSELMQKFPDVANAMLSAINQPDPNQGIMERLTESAFS LVKVRPVGNIEGETADAMIARMENKLRNGDLQGAALEWNGLPEAAKAASADYKKSLDARIEVENLVGGTLNRAITSTGRQ G
Sequences:
>Translated_481_residues MVSGKPPRHSKSKAEPVTIDLDAKDVKAISAEGDAARTDDKAGDQTPVAKAEPSVEETKPAAADPAPVWDQPKKSPLEPE PNVGKTDSSLGAPKAESPADKPKEPVSPAAVPPKADAKPATTAYGASASSAAAAASKPAFGSTASTSASGSAAAAAKPSP ATASSGPAKPSTPQQVERKQAATSGLIAAGIVGGLVALAAAGSMQYAGILPSFTAGEAGSDEIAALKSDIGGLRQQLANA PAADTSTLEQRIATLEAAKSEAPQVDGLSEKITALEAALQSERSAQASATSELTRRLADVETKLNEPRDDIEVARAIASA ALKAAIDRGGPFLTELDTLSKVTPDDPAIASLQSFAATGVPSRSELMQKFPDVANAMLSAINQPDPNQGIMERLTESAFS LVKVRPVGNIEGETADAMIARMENKLRNGDLQGAALEWNGLPEAAKAASADYKKSLDARIEVENLVGGTLNRAITSTGRQ G >Mature_481_residues MVSGKPPRHSKSKAEPVTIDLDAKDVKAISAEGDAARTDDKAGDQTPVAKAEPSVEETKPAAADPAPVWDQPKKSPLEPE PNVGKTDSSLGAPKAESPADKPKEPVSPAAVPPKADAKPATTAYGASASSAAAAASKPAFGSTASTSASGSAAAAAKPSP ATASSGPAKPSTPQQVERKQAATSGLIAAGIVGGLVALAAAGSMQYAGILPSFTAGEAGSDEIAALKSDIGGLRQQLANA PAADTSTLEQRIATLEAAKSEAPQVDGLSEKITALEAALQSERSAQASATSELTRRLADVETKLNEPRDDIEVARAIASA ALKAAIDRGGPFLTELDTLSKVTPDDPAIASLQSFAATGVPSRSELMQKFPDVANAMLSAINQPDPNQGIMERLTESAFS LVKVRPVGNIEGETADAMIARMENKLRNGDLQGAALEWNGLPEAAKAASADYKKSLDARIEVENLVGGTLNRAITSTGRQ G
Specific function: Unknown
COG id: COG4223
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48887; Mature: 48887
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSGKPPRHSKSKAEPVTIDLDAKDVKAISAEGDAARTDDKAGDQTPVAKAEPSVEETKP CCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC AAADPAPVWDQPKKSPLEPEPNVGKTDSSLGAPKAESPADKPKEPVSPAAVPPKADAKPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTAYGASASSAAAAASKPAFGSTASTSASGSAAAAAKPSPATASSGPAKPSTPQQVERKQ CHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AATSGLIAAGIVGGLVALAAAGSMQYAGILPSFTAGEAGSDEIAALKSDIGGLRQQLANA HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC PAADTSTLEQRIATLEAAKSEAPQVDGLSEKITALEAALQSERSAQASATSELTRRLADV CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETKLNEPRDDIEVARAIASAALKAAIDRGGPFLTELDTLSKVTPDDPAIASLQSFAATGV HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC PSRSELMQKFPDVANAMLSAINQPDPNQGIMERLTESAFSLVKVRPVGNIEGETADAMIA CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHH RMENKLRNGDLQGAALEWNGLPEAAKAASADYKKSLDARIEVENLVGGTLNRAITSTGRQ HHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEHHHHHCHHHHHHHHHCCCC G C >Mature Secondary Structure MVSGKPPRHSKSKAEPVTIDLDAKDVKAISAEGDAARTDDKAGDQTPVAKAEPSVEETKP CCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC AAADPAPVWDQPKKSPLEPEPNVGKTDSSLGAPKAESPADKPKEPVSPAAVPPKADAKPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTAYGASASSAAAAASKPAFGSTASTSASGSAAAAAKPSPATASSGPAKPSTPQQVERKQ CHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AATSGLIAAGIVGGLVALAAAGSMQYAGILPSFTAGEAGSDEIAALKSDIGGLRQQLANA HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC PAADTSTLEQRIATLEAAKSEAPQVDGLSEKITALEAALQSERSAQASATSELTRRLADV CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETKLNEPRDDIEVARAIASAALKAAIDRGGPFLTELDTLSKVTPDDPAIASLQSFAATGV HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC PSRSELMQKFPDVANAMLSAINQPDPNQGIMERLTESAFSLVKVRPVGNIEGETADAMIA CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHH RMENKLRNGDLQGAALEWNGLPEAAKAASADYKKSLDARIEVENLVGGTLNRAITSTGRQ HHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEHHHHHCHHHHHHHHHCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA