| Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. | 
|---|---|
| Accession | NC_003062 | 
| Length | 2,841,580 | 
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The map label for this gene is 159185259
Identifier: 159185259
GI number: 159185259
Start: 2509419
End: 2510039
Strand: Reverse
Name: 159185259
Synonym: Atu2537
Alternate gene names: NA
Gene position: 2510039-2509419 (Counterclockwise)
Preceding gene: 159185260
Following gene: 159185258
Centisome position: 88.33
GC content: 57.81
    Gene sequence:
    
>621_bases TTGAACGAGACAGGCTGGCGCGGTTCGTATGAGGGGTGGCTTGAGGCCGCCTATCAGGCCTTGCTGGAATCGGGTGTGGA TTCCGTCAAGATTCTGCCCCTGGCGAAAAAGCTCAGCCTGTCGCGCACGAGCTTCTACTGGTTCTTCAAGGACAGGGAGG AGCTGCTGGCGGCGCTGGTCTCACGCTGGCGGGAAAAGAACACCGGCAGTATCGTCAGGCAGTCGGAGGCCTATGCCGAA ACGCTCGTCGAAGCCATGCTGAATATTTTTGACTGCTGGCTGGACCCCTCGCTTTTTGACAGCCGCTTTGAATTTGCGGT TCGAAGCTGGGCCCTTCAGTCGAACGGGATTCTCGCGGAGGTCGGCAAAGCCGACGACATGAGGATGGCGGCGCTTTCAC GGATGTTCATGCGTTTCGGCCATAGTGAAACCATGGCGGATGTGCGTGCCCGCACCACCTATCTCGTGCAGATCGGCTAT ATTTCCATGCAGTCAGAGGAAGATATGGCGGTGCGGATGCAGAGGATTCCTGACTATATTGCCATCTATACCGGCGAGGT ACCGCAGCAGCGCGAGCTCGACCGGTTTTATGCGAGGCATGGTTACAGGCCGGGTTCGTAG
    Upstream 100 bases:
    
>100_bases TCAATTAAGAAAACACAGGTGTTTATTGCTTCGACATAGCTGGACATTCACCTTGTCGCGCCTGGGCCTATTTGATAGGA AAATCATCATGGAAGCGACA
    Downstream 100 bases:
    
>100_bases GCTGAGAGCCTGTTTGCCTGAAACGTCTGTTGCGGCGCTGCCCCAGCCATGTAGAGAATGACGCACCGACCCTCTGGCTT CCTGCAATGTAGCTGCAACA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Regulatory Protein TetR; TetR Family Regulatory Protein
Number of amino acids: Translated: 206; Mature: 206
    Protein sequence:
    
>206_residues MNETGWRGSYEGWLEAAYQALLESGVDSVKILPLAKKLSLSRTSFYWFFKDREELLAALVSRWREKNTGSIVRQSEAYAE TLVEAMLNIFDCWLDPSLFDSRFEFAVRSWALQSNGILAEVGKADDMRMAALSRMFMRFGHSETMADVRARTTYLVQIGY ISMQSEEDMAVRMQRIPDYIAIYTGEVPQQRELDRFYARHGYRPGS
    Sequences:
    
>Translated_206_residues MNETGWRGSYEGWLEAAYQALLESGVDSVKILPLAKKLSLSRTSFYWFFKDREELLAALVSRWREKNTGSIVRQSEAYAE TLVEAMLNIFDCWLDPSLFDSRFEFAVRSWALQSNGILAEVGKADDMRMAALSRMFMRFGHSETMADVRARTTYLVQIGY ISMQSEEDMAVRMQRIPDYIAIYTGEVPQQRELDRFYARHGYRPGS >Mature_206_residues MNETGWRGSYEGWLEAAYQALLESGVDSVKILPLAKKLSLSRTSFYWFFKDREELLAALVSRWREKNTGSIVRQSEAYAE TLVEAMLNIFDCWLDPSLFDSRFEFAVRSWALQSNGILAEVGKADDMRMAALSRMFMRFGHSETMADVRARTTYLVQIGY ISMQSEEDMAVRMQRIPDYIAIYTGEVPQQRELDRFYARHGYRPGS
Specific function: Unknown
COG id: NA
COG function: NA
    Gene ontology:
  
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
    Homologues:
      
None
    Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
    Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23834; Mature: 23834
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
    Signals:
None
    Transmembrane regions:
None
    Cys/Met content:
0.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETGWRGSYEGWLEAAYQALLESGVDSVKILPLAKKLSLSRTSFYWFFKDREELLAALV CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCEEEEEECCHHHHHHHHH SRWREKNTGSIVRQSEAYAETLVEAMLNIFDCWLDPSLFDSRFEFAVRSWALQSNGILAE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEE VGKADDMRMAALSRMFMRFGHSETMADVRARTTYLVQIGYISMQSEEDMAVRMQRIPDYI CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHCCCEE AIYTGEVPQQRELDRFYARHGYRPGS EEEECCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNETGWRGSYEGWLEAAYQALLESGVDSVKILPLAKKLSLSRTSFYWFFKDREELLAALV CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCEEEEEECCHHHHHHHHH SRWREKNTGSIVRQSEAYAETLVEAMLNIFDCWLDPSLFDSRFEFAVRSWALQSNGILAE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEE VGKADDMRMAALSRMFMRFGHSETMADVRARTTYLVQIGYISMQSEEDMAVRMQRIPDYI CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHCCCEE AIYTGEVPQQRELDRFYARHGYRPGS EEEECCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA
