Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cusR [C]
Identifier: 159185258
GI number: 159185258
Start: 2508595
End: 2509236
Strand: Reverse
Name: cusR [C]
Synonym: Atu2536
Alternate gene names: 159185258
Gene position: 2509236-2508595 (Counterclockwise)
Preceding gene: 159185259
Following gene: 15889800
Centisome position: 88.3
GC content: 60.12
Gene sequence:
>642_bases ATGGCGCGCGCGCTTCTGGAGGCCTTGCGCCGGCGGGATGTGCTTGCCGATCATGTCAGCACCATCAGCGACGCCGATGC CCTTGCGCGGGACGGCTCTTACGATGTCCTGGTTCTGGACCGCCGTCTTCCCGATGGTGAGGGGCTGAATCTTGTGGCTT CGCTTCGCCGCAGCAAAAATTCCGTGCCGATCCTTGTTCTGACCGCGCTCGGAAATGTCGATCACCGTGTCGACGGGCTG GATGCCGGGGCGGATGATTATCTTGCCAAGCCCTTTGCGATCGAAGAATTGCTCGCCCGTCTCAGGGCTCTCCACAGGCG TGGCCCGTCGCTTGCCGACAAATATACGCGGTTCGGAAATCTGGGCATTGATCCGCGCAGCAATGAGGTCAGCGTTGCAG GTTCCAGTATCGAATTGCGGCGGCGGGAGTATCTGGTACTGGAGGCCCTGATGCGGCGTCCGAACCGCATCGTCACGCGG TCGAGCCTGATCGAGGCCGTCTATACGCTCGATGACGAGATCGAGTCCAATGCTCTCGATGCGCATATTTCCCGTATCCG CAAGAAGCTGGCGCAGGCGGAAGCGACGGTGGAGATAAGAGCCGTGCGCAATATTGGTTACCTCGTCCGGTTGAAGACAT GA
Upstream 100 bases:
>100_bases TGCAATGTAGCTGCAACATTCACCGACCAGTGGTGGGAATGGCAAGGGTCCATCTTGGGGAACGTCATTGCGAATCTTGC TTCTTGAGGATGAACCTGAA
Downstream 100 bases:
>100_bases AGAAGACACATGATCGATCCCTGCGATGGGGGCTGATGAAGCGTCTTTTCGCCTTGCAGGCCTTCCTGCTTCTCCTCTTC GTCATCCTTCTCATCGGCTG
Product: two component response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MARALLEALRRRDVLADHVSTISDADALARDGSYDVLVLDRRLPDGEGLNLVASLRRSKNSVPILVLTALGNVDHRVDGL DAGADDYLAKPFAIEELLARLRALHRRGPSLADKYTRFGNLGIDPRSNEVSVAGSSIELRRREYLVLEALMRRPNRIVTR SSLIEAVYTLDDEIESNALDAHISRIRKKLAQAEATVEIRAVRNIGYLVRLKT
Sequences:
>Translated_213_residues MARALLEALRRRDVLADHVSTISDADALARDGSYDVLVLDRRLPDGEGLNLVASLRRSKNSVPILVLTALGNVDHRVDGL DAGADDYLAKPFAIEELLARLRALHRRGPSLADKYTRFGNLGIDPRSNEVSVAGSSIELRRREYLVLEALMRRPNRIVTR SSLIEAVYTLDDEIESNALDAHISRIRKKLAQAEATVEIRAVRNIGYLVRLKT >Mature_212_residues ARALLEALRRRDVLADHVSTISDADALARDGSYDVLVLDRRLPDGEGLNLVASLRRSKNSVPILVLTALGNVDHRVDGLD AGADDYLAKPFAIEELLARLRALHRRGPSLADKYTRFGNLGIDPRSNEVSVAGSSIELRRREYLVLEALMRRPNRIVTRS SLIEAVYTLDDEIESNALDAHISRIRKKLAQAEATVEIRAVRNIGYLVRLKT
Specific function: Probable Member Of A Two-Component Regulatory System Ybcz/Ylca. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=185, Percent_Identity=38.9189189189189, Blast_Score=139, Evalue=1e-34, Organism=Escherichia coli, GI1790552, Length=209, Percent_Identity=36.8421052631579, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI1789402, Length=174, Percent_Identity=40.2298850574713, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1787375, Length=189, Percent_Identity=36.5079365079365, Blast_Score=118, Evalue=2e-28, Organism=Escherichia coli, GI1786599, Length=176, Percent_Identity=34.0909090909091, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI87082012, Length=201, Percent_Identity=34.3283582089552, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1790860, Length=185, Percent_Identity=33.5135135135135, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789809, Length=216, Percent_Identity=31.9444444444444, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1786911, Length=163, Percent_Identity=33.7423312883436, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1788394, Length=194, Percent_Identity=30.4123711340206, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI2367329, Length=177, Percent_Identity=32.2033898305085, Blast_Score=81, Evalue=4e-17, Organism=Escherichia coli, GI1787229, Length=172, Percent_Identity=30.8139534883721, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI145693140, Length=187, Percent_Identity=31.0160427807487, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI1790863, Length=186, Percent_Identity=29.5698924731183, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 23702; Mature: 23570
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARALLEALRRRDVLADHVSTISDADALARDGSYDVLVLDRRLPDGEGLNLVASLRRSKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCC SVPILVLTALGNVDHRVDGLDAGADDYLAKPFAIEELLARLRALHRRGPSLADKYTRFGN CCCEEEEEECCCCCHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC LGIDPRSNEVSVAGSSIELRRREYLVLEALMRRPNRIVTRSSLIEAVYTLDDEIESNALD CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AHISRIRKKLAQAEATVEIRAVRNIGYLVRLKT HHHHHHHHHHHHHHHHHHEEEECCCCEEEEECC >Mature Secondary Structure ARALLEALRRRDVLADHVSTISDADALARDGSYDVLVLDRRLPDGEGLNLVASLRRSKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCC SVPILVLTALGNVDHRVDGLDAGADDYLAKPFAIEELLARLRALHRRGPSLADKYTRFGN CCCEEEEEECCCCCHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC LGIDPRSNEVSVAGSSIELRRREYLVLEALMRRPNRIVTRSSLIEAVYTLDDEIESNALD CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AHISRIRKKLAQAEATVEIRAVRNIGYLVRLKT HHHHHHHHHHHHHHHHHHEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]