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The map label for this gene is ycdJ [C]

Identifier: 159185033

GI number: 159185033

Start: 2024960

End: 2025820

Strand: Direct

Name: ycdJ [C]

Synonym: Atu2061

Alternate gene names: 159185033

Gene position: 2024960-2025820 (Clockwise)

Preceding gene: 159185032

Following gene: 159185034

Centisome position: 71.26

GC content: 56.1

Gene sequence:

>861_bases
ATGACAGCTCCATCTTTGGACAATTGGGAAAAGCGCAAGCGTTTTGTCGAATTGCCGCGCAAGCGCCAAATGGCTTTTAT
AGACACTGGCGGTCCCGGGCCGGTGCTATTGATGCTTCACGGGTTTTCCGACACCAGCCGCAGCTTTTCCATTATCGAAC
CTTATTTCCAGGAATATCGGCTGATTGCTCCTGACCTGCCTGGTCACGGCGCATCGTCCGTAGGACACGGTTTTCATGTC
GCAGACTTCGCTGAAACGATTGACCGCTTTCTGACGCTTATGGGCGTCTCGCGGTTCTTTGTGCTTGGCCACTCCATGGG
CGCCATGACGGCAATCGAACTGGCCGCCCGGCGGTCCTCTTCCGTTCGAGGGCTTGCGCTCATCTCAGGGACGCTGGAGC
CCGATTTCGGCACCGAAAGCAAACTTGCCAGGGATATCCTGGCGTTACGCGATCCGATCAAACCGGCAGGCGGTTTCCTG
CACGACTGGTATTCCTGCAGTCGACCGGTCAACGAGGAATTCCTGTTCCGAATGAAACGCGACGCGGCAAATATGGCGGC
CACAACCTGGCATGGCGTTCTTAAAGCTTTTGCAGAAACTGATCTGCATTACAGCGCGTCGAAAATAAATGTGCCCGTGC
TTTGCCTAGCCGGTTCTGAAGACCCTCTGTTCGATGATTCCCATCGCCAGCAACTCTTCGAGGCTTTCCCCCTGGCGCAA
ACCGTAACGATGCCGGGCCATGGCCACAATCCGCACTGGGAAAATCCGCAAGGTGTTTCCACCTTGGTCACCGAATTCTT
TGCCGAAGTGATGACGGATGCGAGCCCTGTCCGTGTCGAGACAGCCGCCGACAAGCGCTGA

Upstream 100 bases:

>100_bases
CGATCAAGGCCGAGCCGCACCGGCTTGAAACATGGTTGAAAGACGTCTTCGCACTCGACGGCCAGAATGGTCTGGCGACT
GTCAAGGCGGCGCTCGGCCT

Downstream 100 bases:

>100_bases
CATATCCGCATGAATTCGGCAAACGCGGAGAATTCGATTTCGATTCCGGCACCGATGCGATAACGCTTCGCAGCGTAAAC
GAAATCCGGCTTGCCATGAC

Product: hydrolase

Products: NA

Alternate protein names: Atropine acylhydrolase; Atropinesterase [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTAPSLDNWEKRKRFVELPRKRQMAFIDTGGPGPVLLMLHGFSDTSRSFSIIEPYFQEYRLIAPDLPGHGASSVGHGFHV
ADFAETIDRFLTLMGVSRFFVLGHSMGAMTAIELAARRSSSVRGLALISGTLEPDFGTESKLARDILALRDPIKPAGGFL
HDWYSCSRPVNEEFLFRMKRDAANMAATTWHGVLKAFAETDLHYSASKINVPVLCLAGSEDPLFDDSHRQQLFEAFPLAQ
TVTMPGHGHNPHWENPQGVSTLVTEFFAEVMTDASPVRVETAADKR

Sequences:

>Translated_286_residues
MTAPSLDNWEKRKRFVELPRKRQMAFIDTGGPGPVLLMLHGFSDTSRSFSIIEPYFQEYRLIAPDLPGHGASSVGHGFHV
ADFAETIDRFLTLMGVSRFFVLGHSMGAMTAIELAARRSSSVRGLALISGTLEPDFGTESKLARDILALRDPIKPAGGFL
HDWYSCSRPVNEEFLFRMKRDAANMAATTWHGVLKAFAETDLHYSASKINVPVLCLAGSEDPLFDDSHRQQLFEAFPLAQ
TVTMPGHGHNPHWENPQGVSTLVTEFFAEVMTDASPVRVETAADKR
>Mature_285_residues
TAPSLDNWEKRKRFVELPRKRQMAFIDTGGPGPVLLMLHGFSDTSRSFSIIEPYFQEYRLIAPDLPGHGASSVGHGFHVA
DFAETIDRFLTLMGVSRFFVLGHSMGAMTAIELAARRSSSVRGLALISGTLEPDFGTESKLARDILALRDPIKPAGGFLH
DWYSCSRPVNEEFLFRMKRDAANMAATTWHGVLKAFAETDLHYSASKINVPVLCLAGSEDPLFDDSHRQQLFEAFPLAQT
VTMPGHGHNPHWENPQGVSTLVTEFFAEVMTDASPVRVETAADKR

Specific function: Alkaloid degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Escherichia coli, GI1788598, Length=243, Percent_Identity=25.1028806584362, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.10 [H]

Molecular weight: Translated: 31692; Mature: 31561

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPSLDNWEKRKRFVELPRKRQMAFIDTGGPGPVLLMLHGFSDTSRSFSIIEPYFQEYR
CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHCCE
LIAPDLPGHGASSVGHGFHVADFAETIDRFLTLMGVSRFFVLGHSMGAMTAIELAARRSS
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
SVRGLALISGTLEPDFGTESKLARDILALRDPIKPAGGFLHDWYSCSRPVNEEFLFRMKR
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH
DAANMAATTWHGVLKAFAETDLHYSASKINVPVLCLAGSEDPLFDDSHRQQLFEAFPLAQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCHH
TVTMPGHGHNPHWENPQGVSTLVTEFFAEVMTDASPVRVETAADKR
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC
>Mature Secondary Structure 
TAPSLDNWEKRKRFVELPRKRQMAFIDTGGPGPVLLMLHGFSDTSRSFSIIEPYFQEYR
CCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHCCE
LIAPDLPGHGASSVGHGFHVADFAETIDRFLTLMGVSRFFVLGHSMGAMTAIELAARRSS
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
SVRGLALISGTLEPDFGTESKLARDILALRDPIKPAGGFLHDWYSCSRPVNEEFLFRMKR
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH
DAANMAATTWHGVLKAFAETDLHYSASKINVPVLCLAGSEDPLFDDSHRQQLFEAFPLAQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCHH
TVTMPGHGHNPHWENPQGVSTLVTEFFAEVMTDASPVRVETAADKR
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA