Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185034
Identifier: 159185034
GI number: 159185034
Start: 2025940
End: 2026398
Strand: Direct
Name: 159185034
Synonym: Atu2062
Alternate gene names: NA
Gene position: 2025940-2026398 (Clockwise)
Preceding gene: 159185033
Following gene: 15889349
Centisome position: 71.3
GC content: 62.31
Gene sequence:
>459_bases CTGAACCCGCTGCATCTCGCCGCCGCCTTTGCGAGCGGCTGCCTTTTGACGTTGATGGTGCATTTCAACGGTCAGCTTGC CCATTATGGCAATGCGCTGTTTTCCTCCTGGACAGCGCATGGAACCGGCACGGTTGCAGCCCTGATCTATCTCGCCATCA TGCGCCCGAAGAAAGACGCCGCGGCACCGGCAAAACCGAACGCACCGCTCTGGGCCTATTGCGGCGGGGTCGTGGGTGCT GCCATCGTCATCCTCACCTCCACCGCCGTCAATTCGCCGCTGGCGCTCTCGGGCACCATTGCGCTCGGGCTTGGCGGGCA GGTGATCTTCAGTCTTCTCGCCGACCTTTTCGGCCTCTTCGGCCTGCCAAAACGGCGACCGGATGTGCAGGACATGGTGG CGGTCTGCCTCATTCTCTGCGGCAGTGCACTGATCATCCTTGTCGGGAGAGCGGCATGA
Upstream 100 bases:
>100_bases CAAACGCGGAGAATTCGATTTCGATTCCGGCACCGATGCGATAACGCTTCGCAGCGTAAACGAAATCCGGCTTGCCATGA CAGACACGACGCATCTCCGC
Downstream 100 bases:
>100_bases TCGTCTGGATCGCCATGGCCTTTGCCGGCGGCGTGTTCGTGTCGCTAAGCCGGCAGATCAACGGCCGCCTCAGCCTGTCC AACTCACCGCTGATCGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MNPLHLAAAFASGCLLTLMVHFNGQLAHYGNALFSSWTAHGTGTVAALIYLAIMRPKKDAAAPAKPNAPLWAYCGGVVGA AIVILTSTAVNSPLALSGTIALGLGGQVIFSLLADLFGLFGLPKRRPDVQDMVAVCLILCGSALIILVGRAA
Sequences:
>Translated_152_residues MNPLHLAAAFASGCLLTLMVHFNGQLAHYGNALFSSWTAHGTGTVAALIYLAIMRPKKDAAAPAKPNAPLWAYCGGVVGA AIVILTSTAVNSPLALSGTIALGLGGQVIFSLLADLFGLFGLPKRRPDVQDMVAVCLILCGSALIILVGRAA >Mature_152_residues MNPLHLAAAFASGCLLTLMVHFNGQLAHYGNALFSSWTAHGTGTVAALIYLAIMRPKKDAAAPAKPNAPLWAYCGGVVGA AIVILTSTAVNSPLALSGTIALGLGGQVIFSLLADLFGLFGLPKRRPDVQDMVAVCLILCGSALIILVGRAA
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15569; Mature: 15569
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLHLAAAFASGCLLTLMVHFNGQLAHYGNALFSSWTAHGTGTVAALIYLAIMRPKKDA CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC AAPAKPNAPLWAYCGGVVGAAIVILTSTAVNSPLALSGTIALGLGGQVIFSLLADLFGLF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEECCCHHHHHHHHHHHHHHH GLPKRRPDVQDMVAVCLILCGSALIILVGRAA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNPLHLAAAFASGCLLTLMVHFNGQLAHYGNALFSSWTAHGTGTVAALIYLAIMRPKKDA CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC AAPAKPNAPLWAYCGGVVGAAIVILTSTAVNSPLALSGTIALGLGGQVIFSLLADLFGLF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEECCCHHHHHHHHHHHHHHH GLPKRRPDVQDMVAVCLILCGSALIILVGRAA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA