Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is suhB [H]
Identifier: 159184949
GI number: 159184949
Start: 1836844
End: 1837671
Strand: Reverse
Name: suhB [H]
Synonym: Atu1857
Alternate gene names: 159184949
Gene position: 1837671-1836844 (Counterclockwise)
Preceding gene: 159184950
Following gene: 15889157
Centisome position: 64.67
GC content: 58.57
Gene sequence:
>828_bases ATGAGCCTTTCCGATAAAGATATCGAATTCCTCGTTTCCACCGTCGCCGCTGCCGGCGCACAGGAAATCCTGCCCCGCTT CCGAAACCTGAGCGCCGGCGCCATCTCCGAAAAGACCTCCGCCATCGATCTCGTCACCGAGGCAGATGTTCTGGCGGAAA AGGCGATCACCGCCGCGCTACTCGAACGGTTTCCGAAGGCTCATATCGTCGGTGAAGAGACCTATGAGGCGGACCCTTCC GTCATTCCAGCCCTTGCCGATGCGCCGCTTGCCTTCGTGATCGATCCGATCGACGGTACTTTCAATTATGCTTCCGGCTT TCCCGCTTTCGGCACGCTGCTTGCTGTCACGGTCAAGGGTGAGACGGTGGCGGGCATCATCCACGATCCTGTCATGGGCG ACACCATAGTTGCGCTCAAAGGTGAGGGGGCTTACCTCCACCGCAAGAACGGCTCGCAGGCGAAGCTCAAGGTCACGGAT CCCGCGCCACTGTCCGAGATGGTCGGCATCTTTTCCTGGCGTCACAGCCATGAGGATCGCCGTCCTGTCATTGCCGCCAA TCTGGCGAAGATAAAAATGTCGCTTTCGATCAATTGTTCGGCGCATGAATATTGGCTCGTCTCGGCAGGCAAGCTGCATT TCATAGGCCATGAAAATCTGGCGCCGTGGGATCATCTTGCCGGCGTGCTGGTTCATCAGGAGGCGGGTGGCTATACGGCC CGTTTCGACAATACGCCTTACCGGCCCGGCCAGACGGCAGGCGGTATCCTGTCAGCGCCGGACAAGGAAAGCTGGAAGAT GCTGCGGCGGGAAATCGTCGCCTTATAA
Upstream 100 bases:
>100_bases GACCCGAAGCTTTTTGATTTTTCCGCGCTTGCTGTCACCGGCGCGTCACCTGAAGAGCGTAGGGAGGCCAGCCCTCCCTG ATGAAGAAGTGCCCCGCGCC
Downstream 100 bases:
>100_bases GATTGATACTCAGATAGAAGGATATCGCCCATGGCTCTCGAACTCGACATCGCCTCTCTCGCCAATGCGCTTCAGGAAGC GGCGGCAGTGGAAATCCTGC
Product: inositol monophosphatase family protein
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSLSDKDIEFLVSTVAAAGAQEILPRFRNLSAGAISEKTSAIDLVTEADVLAEKAITAALLERFPKAHIVGEETYEADPS VIPALADAPLAFVIDPIDGTFNYASGFPAFGTLLAVTVKGETVAGIIHDPVMGDTIVALKGEGAYLHRKNGSQAKLKVTD PAPLSEMVGIFSWRHSHEDRRPVIAANLAKIKMSLSINCSAHEYWLVSAGKLHFIGHENLAPWDHLAGVLVHQEAGGYTA RFDNTPYRPGQTAGGILSAPDKESWKMLRREIVAL
Sequences:
>Translated_275_residues MSLSDKDIEFLVSTVAAAGAQEILPRFRNLSAGAISEKTSAIDLVTEADVLAEKAITAALLERFPKAHIVGEETYEADPS VIPALADAPLAFVIDPIDGTFNYASGFPAFGTLLAVTVKGETVAGIIHDPVMGDTIVALKGEGAYLHRKNGSQAKLKVTD PAPLSEMVGIFSWRHSHEDRRPVIAANLAKIKMSLSINCSAHEYWLVSAGKLHFIGHENLAPWDHLAGVLVHQEAGGYTA RFDNTPYRPGQTAGGILSAPDKESWKMLRREIVAL >Mature_274_residues SLSDKDIEFLVSTVAAAGAQEILPRFRNLSAGAISEKTSAIDLVTEADVLAEKAITAALLERFPKAHIVGEETYEADPSV IPALADAPLAFVIDPIDGTFNYASGFPAFGTLLAVTVKGETVAGIIHDPVMGDTIVALKGEGAYLHRKNGSQAKLKVTDP APLSEMVGIFSWRHSHEDRRPVIAANLAKIKMSLSINCSAHEYWLVSAGKLHFIGHENLAPWDHLAGVLVHQEAGGYTAR FDNTPYRPGQTAGGILSAPDKESWKMLRREIVAL
Specific function: Displays a 20-fold higher rate of hydrolysis of the D isoform of inositol 1-phosphate than of the L isoform [H]
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI221625487, Length=215, Percent_Identity=27.4418604651163, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI5031789, Length=215, Percent_Identity=27.4418604651163, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI221625507, Length=149, Percent_Identity=30.2013422818792, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI7657236, Length=132, Percent_Identity=34.8484848484849, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI116812595, Length=142, Percent_Identity=33.0985915492958, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1788882, Length=210, Percent_Identity=29.0476190476191, Blast_Score=80, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193202570, Length=222, Percent_Identity=27.9279279279279, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193202572, Length=223, Percent_Identity=26.457399103139, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6321836, Length=209, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6320493, Length=209, Percent_Identity=27.7511961722488, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24664926, Length=214, Percent_Identity=31.7757009345794, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI21357957, Length=240, Percent_Identity=28.75, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24664918, Length=243, Percent_Identity=25.9259259259259, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI21357303, Length=243, Percent_Identity=30.8641975308642, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24664922, Length=203, Percent_Identity=31.0344827586207, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21357329, Length=204, Percent_Identity=25.9803921568627, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29533; Mature: 29402
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSDKDIEFLVSTVAAAGAQEILPRFRNLSAGAISEKTSAIDLVTEADVLAEKAITAAL CCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH LERFPKAHIVGEETYEADPSVIPALADAPLAFVIDPIDGTFNYASGFPAFGTLLAVTVKG HHHCCCCEECCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECC ETVAGIIHDPVMGDTIVALKGEGAYLHRKNGSQAKLKVTDPAPLSEMVGIFSWRHSHEDR CEEEEEEECCCCCCEEEEEECCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCC RPVIAANLAKIKMSLSINCSAHEYWLVSAGKLHFIGHENLAPWDHLAGVLVHQEAGGYTA CCEEEEEEEEEEEEEEEECCCCEEEEEECCEEEEEECCCCCCHHHHCEEEEEECCCCEEE RFDNTPYRPGQTAGGILSAPDKESWKMLRREIVAL ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLSDKDIEFLVSTVAAAGAQEILPRFRNLSAGAISEKTSAIDLVTEADVLAEKAITAAL CCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH LERFPKAHIVGEETYEADPSVIPALADAPLAFVIDPIDGTFNYASGFPAFGTLLAVTVKG HHHCCCCEECCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECC ETVAGIIHDPVMGDTIVALKGEGAYLHRKNGSQAKLKVTDPAPLSEMVGIFSWRHSHEDR CEEEEEEECCCCCCEEEEEECCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCC RPVIAANLAKIKMSLSINCSAHEYWLVSAGKLHFIGHENLAPWDHLAGVLVHQEAGGYTA CCEEEEEEEEEEEEEEEECCCCEEEEEECCEEEEEECCCCCCHHHHCEEEEEECCCCEEE RFDNTPYRPGQTAGGILSAPDKESWKMLRREIVAL ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9720201; 10360571; 10508089 [H]