Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is suhB [H]
Identifier: 15889157
GI number: 15889157
Start: 1835989
End: 1836813
Strand: Reverse
Name: suhB [H]
Synonym: Atu1856
Alternate gene names: 15889157
Gene position: 1836813-1835989 (Counterclockwise)
Preceding gene: 159184949
Following gene: 15889153
Centisome position: 64.64
GC content: 60.61
Gene sequence:
>825_bases ATGGCTCTCGAACTCGACATCGCCTCTCTCGCCAATGCGCTTCAGGAAGCGGCGGCAGTGGAAATCCTGCCGCGGTTTCG TAATCTGGGCGAGGGTGATGTGCGGATCAAGAGCGAGGCGATAGACCTCGTGACCGAAGCCGACGAGGCTGCCGAGCGGC TGATCCGCGCCCGTGTCGAGGAAATCATGCCGCAGGCGCTGTTCATCGGGGAAGAGGCTGTGGCGGCGGATGCATCGCTG CTGAGCAAGCTTGCCGATGCCGATCTGGCTGTCGTGGTCGATCCCATCGACGGCACCTATAATTTCGCCTCCGGCCTGCC GCTCTTCGGCGTGATGATGAGTGTCATCTCCAAGGGCGAGACCGTTGCCGGCCTGATCTTCGATCCGATGGGTAATGACT GGGCGATTGCTGAAAAAGGCTCCGGCGCATGGCTTTGCGCCGCCGATGGATCGCAGACGCAGATGTCGGTCGTGACAGCG CCGCACCTGTCGCAGATGGTGGGTATCGCCAATACAGGCTATTTCGACGTGGAGACCCGGCGCAAGATTTTGATGAACCT CGCGGATGTGCGGCTGTTCACCAGCTATCGTTGTGCTGCGCATGAATACCGCCTGTTCTGCGGCGGCCACATGCATTTCC TGATGTATAACAAGCTGATGCCCTGGGACCATCTGGCCGGCACGTTGATCTCGCAGGAATCGGGCGCCTATGCCGCCCGT CTTGATGGTTCGCCCTATCTGCCGCGCCATGTGGATGGCGGGCTGCTGCTGGCGCCGGATCAGGAGACCTGGGAACTGCT GCGCGAGAAGATTTTTACGGTTTGA
Upstream 100 bases:
>100_bases AGGCGGTATCCTGTCAGCGCCGGACAAGGAAAGCTGGAAGATGCTGCGGCGGGAAATCGTCGCCTTATAAGATTGATACT CAGATAGAAGGATATCGCCC
Downstream 100 bases:
>100_bases ACGAACAACAGCTGTTTTCAATAAAAAGGGCGCGGAACAGAATTCCGCGCCCTTTCTTTTTGTCTGTCCGAACTTACCGT GTCGGCTTGTTGTGGGCCTG
Product: inositol monophosphatase family protein
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MALELDIASLANALQEAAAVEILPRFRNLGEGDVRIKSEAIDLVTEADEAAERLIRARVEEIMPQALFIGEEAVAADASL LSKLADADLAVVVDPIDGTYNFASGLPLFGVMMSVISKGETVAGLIFDPMGNDWAIAEKGSGAWLCAADGSQTQMSVVTA PHLSQMVGIANTGYFDVETRRKILMNLADVRLFTSYRCAAHEYRLFCGGHMHFLMYNKLMPWDHLAGTLISQESGAYAAR LDGSPYLPRHVDGGLLLAPDQETWELLREKIFTV
Sequences:
>Translated_274_residues MALELDIASLANALQEAAAVEILPRFRNLGEGDVRIKSEAIDLVTEADEAAERLIRARVEEIMPQALFIGEEAVAADASL LSKLADADLAVVVDPIDGTYNFASGLPLFGVMMSVISKGETVAGLIFDPMGNDWAIAEKGSGAWLCAADGSQTQMSVVTA PHLSQMVGIANTGYFDVETRRKILMNLADVRLFTSYRCAAHEYRLFCGGHMHFLMYNKLMPWDHLAGTLISQESGAYAAR LDGSPYLPRHVDGGLLLAPDQETWELLREKIFTV >Mature_273_residues ALELDIASLANALQEAAAVEILPRFRNLGEGDVRIKSEAIDLVTEADEAAERLIRARVEEIMPQALFIGEEAVAADASLL SKLADADLAVVVDPIDGTYNFASGLPLFGVMMSVISKGETVAGLIFDPMGNDWAIAEKGSGAWLCAADGSQTQMSVVTAP HLSQMVGIANTGYFDVETRRKILMNLADVRLFTSYRCAAHEYRLFCGGHMHFLMYNKLMPWDHLAGTLISQESGAYAARL DGSPYLPRHVDGGLLLAPDQETWELLREKIFTV
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=224, Percent_Identity=27.6785714285714, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI221625487, Length=222, Percent_Identity=27.4774774774775, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI221625507, Length=128, Percent_Identity=32.03125, Blast_Score=68, Evalue=7e-12, Organism=Escherichia coli, GI1788882, Length=209, Percent_Identity=31.5789473684211, Blast_Score=79, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193202570, Length=221, Percent_Identity=28.5067873303167, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI193202572, Length=226, Percent_Identity=28.3185840707965, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321836, Length=144, Percent_Identity=29.8611111111111, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320493, Length=213, Percent_Identity=29.1079812206573, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI21357957, Length=245, Percent_Identity=24.8979591836735, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24664922, Length=220, Percent_Identity=29.5454545454545, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24664918, Length=234, Percent_Identity=25.2136752136752, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24664926, Length=219, Percent_Identity=28.7671232876712, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29820; Mature: 29688
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALELDIASLANALQEAAAVEILPRFRNLGEGDVRIKSEAIDLVTEADEAAERLIRARVE CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH EIMPQALFIGEEAVAADASLLSKLADADLAVVVDPIDGTYNFASGLPLFGVMMSVISKGE HHCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHCCC TVAGLIFDPMGNDWAIAEKGSGAWLCAADGSQTQMSVVTAPHLSQMVGIANTGYFDVETR EEEEEEECCCCCCEEEEECCCCEEEEECCCCCCEEEEEECHHHHHHHHCCCCCEEEHHHH RKILMNLADVRLFTSYRCAAHEYRLFCGGHMHFLMYNKLMPWDHLAGTLISQESGAYAAR HHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEHHHCCCCHHHHHHHHHCCCCCCEEEE LDGSPYLPRHVDGGLLLAPDQETWELLREKIFTV CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure ALELDIASLANALQEAAAVEILPRFRNLGEGDVRIKSEAIDLVTEADEAAERLIRARVE EEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH EIMPQALFIGEEAVAADASLLSKLADADLAVVVDPIDGTYNFASGLPLFGVMMSVISKGE HHCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHCCC TVAGLIFDPMGNDWAIAEKGSGAWLCAADGSQTQMSVVTAPHLSQMVGIANTGYFDVETR EEEEEEECCCCCCEEEEECCCCEEEEECCCCCCEEEEEECHHHHHHHHCCCCCEEEHHHH RKILMNLADVRLFTSYRCAAHEYRLFCGGHMHFLMYNKLMPWDHLAGTLISQESGAYAAR HHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEHHHCCCCHHHHHHHHHCCCCCCEEEE LDGSPYLPRHVDGGLLLAPDQETWELLREKIFTV CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]