| Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. | 
|---|---|
| Accession | NC_003062 | 
| Length | 2,841,580 | 
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The map label for this gene is yitW [H]
Identifier: 159184933
GI number: 159184933
Start: 1799323
End: 1799706
Strand: Reverse
Name: yitW [H]
Synonym: Atu1820
Alternate gene names: 159184933
Gene position: 1799706-1799323 (Counterclockwise)
Preceding gene: 159184934
Following gene: 15889122
Centisome position: 63.33
GC content: 59.64
    Gene sequence:
    
>384_bases ATGACTGCGGAAGCCACTGCAAAGACACAAGATGCAACGGAAGAAGCGGCAAAGCCGTCTTCCATTCCGCCCGACGAGCT GGCGCGTCTCAGCGACGACGTGATCTCGGCGCTGAAGACCGTCTACGACCCGGAAATTCCGGCCGATATTTTTGAGCTCG GTCTGATCTACAAGATCGATATCGAGGACGACCGGATGGTCAAGATCGTCATGACGCTGACAGCGCCCGGTTGCCCGGTT GCCGGTGAAATGCCGGGCTGGGTGGAAAACGCTGTTGGCGCTGTCGAAGGTGTTTCCGGCGTTGACGTGTCGATGACCTT CGATCCGCCATGGACGCCGGAGCGCATGTCGGAAGAGGCGCAGGTCGCCGTCGGCTGGTATTGA
    Upstream 100 bases:
    
>100_bases ACCCGCGCCGAAGTAGATCGTCTTGTTGAGGCGCTGGACTATGCGCGCAAATTTTTCGCCTGATATCGGCATAGATGAGA TCAGGATTGAGGATCAGACC
    Downstream 100 bases:
    
>100_bases GACTGACGCGATTTTGACAGGCGTCATCTCTTGATGACACTGCCGGGTGCACTTAAATTGAATTCCATAAGCATCGAGCC TTGAACTCGATTGTCGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
    Protein sequence:
    
>127_residues MTAEATAKTQDATEEAAKPSSIPPDELARLSDDVISALKTVYDPEIPADIFELGLIYKIDIEDDRMVKIVMTLTAPGCPV AGEMPGWVENAVGAVEGVSGVDVSMTFDPPWTPERMSEEAQVAVGWY
    Sequences:
    
>Translated_127_residues MTAEATAKTQDATEEAAKPSSIPPDELARLSDDVISALKTVYDPEIPADIFELGLIYKIDIEDDRMVKIVMTLTAPGCPV AGEMPGWVENAVGAVEGVSGVDVSMTFDPPWTPERMSEEAQVAVGWY >Mature_126_residues TAEATAKTQDATEEAAKPSSIPPDELARLSDDVISALKTVYDPEIPADIFELGLIYKIDIEDDRMVKIVMTLTAPGCPVA GEMPGWVENAVGAVEGVSGVDVSMTFDPPWTPERMSEEAQVAVGWY
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
    Gene ontology:
  
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
    Homologues:
      
None
    Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
    Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 13658; Mature: 13527
Theoretical pI: Translated: 3.74; Mature: 3.74
Prosite motif: NA
Important sites: NA
    Signals:
None
    Transmembrane regions:
None
    Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEATAKTQDATEEAAKPSSIPPDELARLSDDVISALKTVYDPEIPADIFELGLIYKID CCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEE IEDDRMVKIVMTLTAPGCPVAGEMPGWVENAVGAVEGVSGVDVSMTFDPPWTPERMSEEA CCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCC QVAVGWY EEEECCC >Mature Secondary Structure TAEATAKTQDATEEAAKPSSIPPDELARLSDDVISALKTVYDPEIPADIFELGLIYKID CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEE IEDDRMVKIVMTLTAPGCPVAGEMPGWVENAVGAVEGVSGVDVSMTFDPPWTPERMSEEA CCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCC QVAVGWY EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]
