Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184914
Identifier: 159184914
GI number: 159184914
Start: 1765995
End: 1766306
Strand: Reverse
Name: 159184914
Synonym: Atu1779
Alternate gene names: NA
Gene position: 1766306-1765995 (Counterclockwise)
Preceding gene: 15889086
Following gene: 15889082
Centisome position: 62.16
GC content: 59.29
Gene sequence:
>312_bases ATGACTGGACTGGTGCGCACGAGCGCTGACCTCGATCCGAGGCGCAGGCGGATACTTTACCGCTGCTGGCACCGGGGCAT TCGCGAGATGGATCTTGTGCTCGGGCAATTTGCGGAAGACAATATTGCCGGGCTTTCCGACGAGCAGCTCGACGAGCTGG AAATCATCATGGCGGAAGAGGATAACGACCTTGTCCAGATGGTGACGGGCGCGCAGCCGGTGCCGGAAAAATTCCAGACG CCGCTGTTTGAGAAGATCGCCTCCTACCGTCCCGATTTCGATCTCGTCACCGCCGAAACCCTGAAGGCCTGA
Upstream 100 bases:
>100_bases GGCATTATTTCGATAAAAACCGGTTTCAAGCGTTCGCCTCCTGTTCTATAGGAGGTCGCAATCAACATCCCGTTGAATAG CCAACCGAAAGGTGAATGCG
Downstream 100 bases:
>100_bases AACATGATAGCCGGATTCGATGCAAAGCTGGTGGCGTCGGCCGATACGCCGCTGACCATCGGAAACGTACCATCAGGCAT GGAAGCCCTGCTGCTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTGLVRTSADLDPRRRRILYRCWHRGIREMDLVLGQFAEDNIAGLSDEQLDELEIIMAEEDNDLVQMVTGAQPVPEKFQT PLFEKIASYRPDFDLVTAETLKA
Sequences:
>Translated_103_residues MTGLVRTSADLDPRRRRILYRCWHRGIREMDLVLGQFAEDNIAGLSDEQLDELEIIMAEEDNDLVQMVTGAQPVPEKFQT PLFEKIASYRPDFDLVTAETLKA >Mature_102_residues TGLVRTSADLDPRRRRILYRCWHRGIREMDLVLGQFAEDNIAGLSDEQLDELEIIMAEEDNDLVQMVTGAQPVPEKFQTP LFEKIASYRPDFDLVTAETLKA
Specific function: Unknown
COG id: COG2938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11825; Mature: 11693
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLVRTSADLDPRRRRILYRCWHRGIREMDLVLGQFAEDNIAGLSDEQLDELEIIMAEE CCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC DNDLVQMVTGAQPVPEKFQTPLFEKIASYRPDFDLVTAETLKA CCHHHHHHHCCCCCCHHHCCHHHHHHHHCCCCCCEECHHHHCC >Mature Secondary Structure TGLVRTSADLDPRRRRILYRCWHRGIREMDLVLGQFAEDNIAGLSDEQLDELEIIMAEE CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC DNDLVQMVTGAQPVPEKFQTPLFEKIASYRPDFDLVTAETLKA CCHHHHHHHCCCCCCHHHCCHHHHHHHHCCCCCCEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA