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The map label for this gene is rssA [H]

Identifier: 159184899

GI number: 159184899

Start: 1737604

End: 1738542

Strand: Direct

Name: rssA [H]

Synonym: Atu1751

Alternate gene names: 159184899

Gene position: 1737604-1738542 (Clockwise)

Preceding gene: 159184898

Following gene: 159184900

Centisome position: 61.15

GC content: 65.28

Gene sequence:

>939_bases
ATGTTGGGATGGGGAAATCGTCACAATCAGCTTGCGGCTAGAAATCCCGAAACCACCGGCAATGAGCCGCCCGTCACCCA
GATCGTTGACAAGCACCGCATCGCGCTTGCGCTTGGCGGCGGGGCGGCCCGCGGCTGGGCCCATATCGGCGTGCTTCGGG
CGCTGGATGAAGCAGGCGTGAAGATCGGCATGATCGCCGGCACCTCGATCGGCGCACTGGTCGGCGGTTGTTATCTCGCC
GGCAAGCTCGACGAGCTGGAGGAATTCGCACGATCGCTGACGATGCGCCGCATTGCCGGCCTGCTCGACCTGACGATCGG
CGGCGGCGGCCTCTTCGGCGGCATGCGGCTGACCAAGCGCATGCAGGAGCATCTGGAAGGCCTGCGCGTCGAAAACCTCG
AGCACCCCTTCATCGCTGTCGCCACGGAACTGCGAACCGGCCACGAGGTCTGGATCCATCAAGGTGATCTCGTCACCGCG
CTGCGCTCCTCCTACGCGCTGCCCGGCATCTTCGAGCCCGTGCAATGCAATGGCCGCACCCTGATCGACGGCGCGCTCGT
CAATCCCGTGCCCGTTTCCGTCTGCCGGGCCTATGAGCAGGCGCTGGTCGTTGCGGTAAACCTCAATTACGATCTTTTCG
GCCGTTCCGCCGTGGTCAAGCACGCGGCCTCACCACAGGGCGGCGGCACACCGCCCGCGGAAACGGCGCCGCGTCCCGGC
CTGCCGGGCGTCATGGTGCAGGCCTTCAACATCATTCAGGACAGAATTTCGCGCTCGCGCCTGGCGGGCGATCCGCCCGA
CCTCATGCTGCATCCGCGCATCAACGATATCGGCCTGTCGGAATTCCATCGCGCCAGCGAAGCCATCGACCGCGGATATC
AGGAAACGCGCGCGCGTATTCCCGAACTCGAGCGCATGCAGCAGGCATTCCGGCGCTGA

Upstream 100 bases:

>100_bases
CATAATCGGCCACCTTCCATCGGCCGCACCAATTTGCTACCAATATAGCAGGCTCCGGGGGTAAGGGCGGAACCTGAAAG
GCAGGCAGGGAGTGCGACAA

Downstream 100 bases:

>100_bases
CGGCGAGACCCTCGCCTCCTCACCGTGTCAGTTCCTCGTCGGAATGCCCCGCCAGAACCCACCTTACATGACAAATGGGA
TCATCCGGCAATATAGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MLGWGNRHNQLAARNPETTGNEPPVTQIVDKHRIALALGGGAARGWAHIGVLRALDEAGVKIGMIAGTSIGALVGGCYLA
GKLDELEEFARSLTMRRIAGLLDLTIGGGGLFGGMRLTKRMQEHLEGLRVENLEHPFIAVATELRTGHEVWIHQGDLVTA
LRSSYALPGIFEPVQCNGRTLIDGALVNPVPVSVCRAYEQALVVAVNLNYDLFGRSAVVKHAASPQGGGTPPAETAPRPG
LPGVMVQAFNIIQDRISRSRLAGDPPDLMLHPRINDIGLSEFHRASEAIDRGYQETRARIPELERMQQAFRR

Sequences:

>Translated_312_residues
MLGWGNRHNQLAARNPETTGNEPPVTQIVDKHRIALALGGGAARGWAHIGVLRALDEAGVKIGMIAGTSIGALVGGCYLA
GKLDELEEFARSLTMRRIAGLLDLTIGGGGLFGGMRLTKRMQEHLEGLRVENLEHPFIAVATELRTGHEVWIHQGDLVTA
LRSSYALPGIFEPVQCNGRTLIDGALVNPVPVSVCRAYEQALVVAVNLNYDLFGRSAVVKHAASPQGGGTPPAETAPRPG
LPGVMVQAFNIIQDRISRSRLAGDPPDLMLHPRINDIGLSEFHRASEAIDRGYQETRARIPELERMQQAFRR
>Mature_312_residues
MLGWGNRHNQLAARNPETTGNEPPVTQIVDKHRIALALGGGAARGWAHIGVLRALDEAGVKIGMIAGTSIGALVGGCYLA
GKLDELEEFARSLTMRRIAGLLDLTIGGGGLFGGMRLTKRMQEHLEGLRVENLEHPFIAVATELRTGHEVWIHQGDLVTA
LRSSYALPGIFEPVQCNGRTLIDGALVNPVPVSVCRAYEQALVVAVNLNYDLFGRSAVVKHAASPQGGGTPPAETAPRPG
LPGVMVQAFNIIQDRISRSRLAGDPPDLMLHPRINDIGLSEFHRASEAIDRGYQETRARIPELERMQQAFRR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=210, Percent_Identity=30, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI116256487, Length=210, Percent_Identity=30, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI260656043, Length=210, Percent_Identity=30, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI260656039, Length=210, Percent_Identity=30, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI260656037, Length=210, Percent_Identity=30, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI148727335, Length=210, Percent_Identity=30.4761904761905, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI148727290, Length=210, Percent_Identity=30.4761904761905, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI226510936, Length=293, Percent_Identity=38.5665529010239, Blast_Score=198, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI71997299, Length=166, Percent_Identity=31.3253012048193, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71997289, Length=166, Percent_Identity=31.3253012048193, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193204778, Length=168, Percent_Identity=31.547619047619, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323581, Length=193, Percent_Identity=31.0880829015544, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281376913, Length=183, Percent_Identity=31.6939890710383, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI28571388, Length=183, Percent_Identity=32.2404371584699, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33728; Mature: 33728

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGWGNRHNQLAARNPETTGNEPPVTQIVDKHRIALALGGGAARGWAHIGVLRALDEAGV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
KIGMIAGTSIGALVGGCYLAGKLDELEEFARSLTMRRIAGLLDLTIGGGGLFGGMRLTKR
EEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH
MQEHLEGLRVENLEHPFIAVATELRTGHEVWIHQGDLVTALRSSYALPGIFEPVQCNGRT
HHHHHHCCCCCCCCCCHHEEHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCE
LIDGALVNPVPVSVCRAYEQALVVAVNLNYDLFGRSAVVKHAASPQGGGTPPAETAPRPG
EECCCCCCCHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
LPGVMVQAFNIIQDRISRSRLAGDPPDLMLHPRINDIGLSEFHRASEAIDRGYQETRARI
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHCC
PELERMQQAFRR
CHHHHHHHHHCC
>Mature Secondary Structure
MLGWGNRHNQLAARNPETTGNEPPVTQIVDKHRIALALGGGAARGWAHIGVLRALDEAGV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
KIGMIAGTSIGALVGGCYLAGKLDELEEFARSLTMRRIAGLLDLTIGGGGLFGGMRLTKR
EEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH
MQEHLEGLRVENLEHPFIAVATELRTGHEVWIHQGDLVTALRSSYALPGIFEPVQCNGRT
HHHHHHCCCCCCCCCCHHEEHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCE
LIDGALVNPVPVSVCRAYEQALVVAVNLNYDLFGRSAVVKHAASPQGGGTPPAETAPRPG
EECCCCCCCHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
LPGVMVQAFNIIQDRISRSRLAGDPPDLMLHPRINDIGLSEFHRASEAIDRGYQETRARI
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHCC
PELERMQQAFRR
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]