Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184659
Identifier: 159184659
GI number: 159184659
Start: 1184274
End: 1184741
Strand: Direct
Name: 159184659
Synonym: Atu1192
Alternate gene names: NA
Gene position: 1184274-1184741 (Clockwise)
Preceding gene: 15888528
Following gene: 159184660
Centisome position: 41.68
GC content: 55.56
Gene sequence:
>468_bases GTGACGACCACTACTGAAACGACCAAGCGCGATGCAGCTTTCACAGTGTCTCGCGTCATCAATATGCTCCGAACCCTAAG CCCTGATATGCCGATGCAGCAAGCGGACGTTCTGTTTCAGGTCGTTCTCTATCCGGGCCTCACCATGGCCGATATCTGCA AGAGAACCGGACTGTCTCAATCCTCGGTCTCGCGCAACGTCTCTGCCATGTCAAAATTCCATCGCCTCGGGAAGCCGGGG CTGGACCTTGTGGAAGCTGTCATCGACCCTCGGGAACCCCGGCGTCGTCTGATATTCCTCACAACTCACGGCAAGGCATT CATCACGAAATTGCTCCGCAACGTCGATGCAGAATATTCGGTCGATAAGGAAACGGATGCTCGCCTTGAGATCGAGCGTA TGCACGAAGAGGCAATGGCCAAGGAAGAAACCAGCTCGACCCGTGGACGCGCAAAGCGGCCTCAGTAA
Upstream 100 bases:
>100_bases AAGTCGGTAGCACGGGAAAAAAGGGCTGGACAACACGGCCTCTCGGCGGTCTATCCATGAGCGGGTAGATTTTCACCGGC GACATGACAGGAGAGGCCCC
Downstream 100 bases:
>100_bases GTAGCTGGTGCCCGCAGCCGGACTTGAACCGGCAAGCCAGAGGCGGCGCATTTTAAGTGCGATGTGTTTACCAATTTCAC CATGCGGGCGGCTGCTTCTC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; MarR Family Transcriptional Regulator; Transcriptional Regulator MarR Family Protein
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTTTTETTKRDAAFTVSRVINMLRTLSPDMPMQQADVLFQVVLYPGLTMADICKRTGLSQSSVSRNVSAMSKFHRLGKPG LDLVEAVIDPREPRRRLIFLTTHGKAFITKLLRNVDAEYSVDKETDARLEIERMHEEAMAKEETSSTRGRAKRPQ
Sequences:
>Translated_155_residues MTTTTETTKRDAAFTVSRVINMLRTLSPDMPMQQADVLFQVVLYPGLTMADICKRTGLSQSSVSRNVSAMSKFHRLGKPG LDLVEAVIDPREPRRRLIFLTTHGKAFITKLLRNVDAEYSVDKETDARLEIERMHEEAMAKEETSSTRGRAKRPQ >Mature_154_residues TTTTETTKRDAAFTVSRVINMLRTLSPDMPMQQADVLFQVVLYPGLTMADICKRTGLSQSSVSRNVSAMSKFHRLGKPGL DLVEAVIDPREPRRRLIFLTTHGKAFITKLLRNVDAEYSVDKETDARLEIERMHEEAMAKEETSSTRGRAKRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17540; Mature: 17409
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTETTKRDAAFTVSRVINMLRTLSPDMPMQQADVLFQVVLYPGLTMADICKRTGLSQ CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCH SSVSRNVSAMSKFHRLGKPGLDLVEAVIDPREPRRRLIFLTTHGKAFITKLLRNVDAEYS HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCC VDKETDARLEIERMHEEAMAKEETSSTRGRAKRPQ CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTTTETTKRDAAFTVSRVINMLRTLSPDMPMQQADVLFQVVLYPGLTMADICKRTGLSQ CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCH SSVSRNVSAMSKFHRLGKPGLDLVEAVIDPREPRRRLIFLTTHGKAFITKLLRNVDAEYS HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCC VDKETDARLEIERMHEEAMAKEETSSTRGRAKRPQ CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA