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The map label for this gene is int [H]

Identifier: 159184660

GI number: 159184660

Start: 1184885

End: 1186051

Strand: Direct

Name: int [H]

Synonym: Atu1194

Alternate gene names: 159184660

Gene position: 1184885-1186051 (Clockwise)

Preceding gene: 159184659

Following gene: 15888531

Centisome position: 41.7

GC content: 57.24

Gene sequence:

>1167_bases
ATGGCGAAGAAACGTGGTTCCTCTTGGGAAGGAACCGTAACTCATAAAGGCGCTCGGCACCGCCGCAGCTTCGCAACAGA
AAGCGAAGCAGAACTTTGGGAACTCGACAGTAAGGCGAAGCTCATCAGGGGCGAACCGATCGACATGGGTGAGAAGGCCG
CGAAGCGTAGGGGAGACCTCCCGTACACGCTCGGGGAGCTGGTCCAGCACGTTTATGAGACCCACTGGGCACCAATGCCC
TCGGGTGCAAAGCAGCTCATCAACGCGAACCTTATCGTTGCTGAGATCGGCGCAAATCTCCCAGTCGCAAAACTGGGGAA
AGCTGACGTTGACCGCGCTCGTTCAAAGCTGCTGGCGGCTGGCAACGCTCCGGGGACAGTGAACCGGAAGGTCGCGGCTC
TTTCCAAATGCCTCTCAGAAGCCGAGGACTTGGGCATCATCGAGCGAAAGCCGAAGTGCAACAAGTACAAGGAGAGCGAA
CACCGGGTTCGTCGCTTCACACCGGACGAGGAGAAGAAGACGCTCGCGTTCTTTGATCGCATCGGGCACCAAGACATGGC
CGATTACACCGTCCTATCTCTGGACACCGGCATGCGCCAAAGCGAAGTCTTATCTCTCCATTTCGAGGACATCCAGAATG
GCCGTGTGACCGTTTGGGGTGTGGGCGCAACCGGGCAGCGTACCAAGTCCGGCAAGAGCCGCACCGTGCCTCTGACAGCT
CGTGCCCAGGCGGTCTTTGATCGTCGCCGCGAATACACCGAGGGCAAGGCGGTGTTTCCGAGCCTCTCCAAAAACTCGGT
CGCGCATTACTGGGGTCGTCTCTCGGAGGCGCTCAATCTGGAAAGCGACAAGCAATTCGTGCCGCATATCCTTCGTCATG
AGTTCTGCTCAAGACTTGCTTCTAACGGTGAGAACGCTGCTGCCATCCAGAAGCTCGCAGGCCATGCAACACTGCTGGTC
ACCCAGCGCTATGTGCACCTCTTCGGTGATGAGCTGGATGATGTCATTGGTCGCATGGAAAAGAAGGAAACTCTCGCCGG
TAACCGTGCCACAACGGTCATCGTAGACGAGATTGAGACGGACACCCAAGCGCTCGCCCAGCTACTCTCGCAGTTGCCAC
AAGATCAGCTCAAGGCGATCTTTAAGACTGTGATTTCAGCGTCTTAA

Upstream 100 bases:

>100_bases
CGGCGCATTTTAAGTGCGATGTGTTTACCAATTTCACCATGCGGGCGGCTGCTTCTCGGTATGCCGGATGCATTCCCATG
TCAACTTGAAGGAGAGCTAA

Downstream 100 bases:

>100_bases
GCCGCACACTGGAAATAATCTTCGTGTGCGTCTTGTGGCTGATGTCGTGGCCACGCCCTACCTCTCACGACAAGTATAGG
CTTCGGGCGTAGCTAAAACC

Product: phage-related integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MAKKRGSSWEGTVTHKGARHRRSFATESEAELWELDSKAKLIRGEPIDMGEKAAKRRGDLPYTLGELVQHVYETHWAPMP
SGAKQLINANLIVAEIGANLPVAKLGKADVDRARSKLLAAGNAPGTVNRKVAALSKCLSEAEDLGIIERKPKCNKYKESE
HRVRRFTPDEEKKTLAFFDRIGHQDMADYTVLSLDTGMRQSEVLSLHFEDIQNGRVTVWGVGATGQRTKSGKSRTVPLTA
RAQAVFDRRREYTEGKAVFPSLSKNSVAHYWGRLSEALNLESDKQFVPHILRHEFCSRLASNGENAAAIQKLAGHATLLV
TQRYVHLFGDELDDVIGRMEKKETLAGNRATTVIVDEIETDTQALAQLLSQLPQDQLKAIFKTVISAS

Sequences:

>Translated_388_residues
MAKKRGSSWEGTVTHKGARHRRSFATESEAELWELDSKAKLIRGEPIDMGEKAAKRRGDLPYTLGELVQHVYETHWAPMP
SGAKQLINANLIVAEIGANLPVAKLGKADVDRARSKLLAAGNAPGTVNRKVAALSKCLSEAEDLGIIERKPKCNKYKESE
HRVRRFTPDEEKKTLAFFDRIGHQDMADYTVLSLDTGMRQSEVLSLHFEDIQNGRVTVWGVGATGQRTKSGKSRTVPLTA
RAQAVFDRRREYTEGKAVFPSLSKNSVAHYWGRLSEALNLESDKQFVPHILRHEFCSRLASNGENAAAIQKLAGHATLLV
TQRYVHLFGDELDDVIGRMEKKETLAGNRATTVIVDEIETDTQALAQLLSQLPQDQLKAIFKTVISAS
>Mature_387_residues
AKKRGSSWEGTVTHKGARHRRSFATESEAELWELDSKAKLIRGEPIDMGEKAAKRRGDLPYTLGELVQHVYETHWAPMPS
GAKQLINANLIVAEIGANLPVAKLGKADVDRARSKLLAAGNAPGTVNRKVAALSKCLSEAEDLGIIERKPKCNKYKESEH
RVRRFTPDEEKKTLAFFDRIGHQDMADYTVLSLDTGMRQSEVLSLHFEDIQNGRVTVWGVGATGQRTKSGKSRTVPLTAR
AQAVFDRRREYTEGKAVFPSLSKNSVAHYWGRLSEALNLESDKQFVPHILRHEFCSRLASNGENAAAIQKLAGHATLLVT
QRYVHLFGDELDDVIGRMEKKETLAGNRATTVIVDEIETDTQALAQLLSQLPQDQLKAIFKTVISAS

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011932 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 43049; Mature: 42918

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKRGSSWEGTVTHKGARHRRSFATESEAELWELDSKAKLIRGEPIDMGEKAAKRRGDL
CCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCC
PYTLGELVQHVYETHWAPMPSGAKQLINANLIVAEIGANLPVAKLGKADVDRARSKLLAA
CHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHHC
GNAPGTVNRKVAALSKCLSEAEDLGIIERKPKCNKYKESEHRVRRFTPDEEKKTLAFFDR
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
IGHQDMADYTVLSLDTGMRQSEVLSLHFEDIQNGRVTVWGVGATGQRTKSGKSRTVPLTA
HCCCCHHCEEEEEECCCCCHHHHHEEEHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEHH
RAQAVFDRRREYTEGKAVFPSLSKNSVAHYWGRLSEALNLESDKQFVPHILRHEFCSRLA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SNGENAAAIQKLAGHATLLVTQRYVHLFGDELDDVIGRMEKKETLAGNRATTVIVDEIET
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
DTQALAQLLSQLPQDQLKAIFKTVISAS
CHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKKRGSSWEGTVTHKGARHRRSFATESEAELWELDSKAKLIRGEPIDMGEKAAKRRGDL
CCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCC
PYTLGELVQHVYETHWAPMPSGAKQLINANLIVAEIGANLPVAKLGKADVDRARSKLLAA
CHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHHC
GNAPGTVNRKVAALSKCLSEAEDLGIIERKPKCNKYKESEHRVRRFTPDEEKKTLAFFDR
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
IGHQDMADYTVLSLDTGMRQSEVLSLHFEDIQNGRVTVWGVGATGQRTKSGKSRTVPLTA
HCCCCHHCEEEEEECCCCCHHHHHEEEHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEHH
RAQAVFDRRREYTEGKAVFPSLSKNSVAHYWGRLSEALNLESDKQFVPHILRHEFCSRLA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SNGENAAAIQKLAGHATLLVTQRYVHLFGDELDDVIGRMEKKETLAGNRATTVIVDEIET
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
DTQALAQLLSQLPQDQLKAIFKTVISAS
CHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA