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The map label for this gene is ycgG [C]

Identifier: 159184620

GI number: 159184620

Start: 1104423

End: 1106360

Strand: Direct

Name: ycgG [C]

Synonym: Atu1114

Alternate gene names: 159184620

Gene position: 1104423-1106360 (Clockwise)

Preceding gene: 159184618

Following gene: 15888454

Centisome position: 38.87

GC content: 58.2

Gene sequence:

>1938_bases
ATGATGGAATTGATCGTCGCTCAAGCGGCCGCATCGGCCGCCGAACTGCCATTTCTGCTGCTTCAGGCCGCAGCCGTGGT
TGGCATGGTGTCCATGCTGATGCTTCTGCAACGACACATAGCTTTCGATGACGTCCGGTATAAAATTTACTATGGAGTTG
TTTTTGGAGCGACCGGCTTTCTGCTGACGCTGCTGGTGTCCGAGTTCATTCAACTGCCCTCCAAGCCTTATATTCGTTCG
GATCTGTTGTTTCTGGCGGGGGTAGTCGGGTCCTGGCAGGGCGGGTTGATAAGTCTGGCGCTGATTTCCGCCGGGCGCTT
CCTGTTCGGTGGTCCGGCCCTCTTTGGCGCGGCTTTTCTGGATATGAGCGTTATTTCCGCTTTCGGCATCGCCATATATG
GCTGGATGCGCCGGCGCCGTCTGACCGAACTTGGCATGCGGGAGATCGCCGGGGTTTTTGCGATCAGGATTTTCGCCGCG
CTGTTCGCGATTTGCCTGACCTATGGTCTTGGCATGGTCGGTCAGGACGTGTTTTTGAGCAATGTTGGACGGCGTATTGT
CGGCGCGACCGTCGGCCTGCCGATGATCGCCTGTCTCTTCCTGCTCCTGCGTAGCGAAGCGCGGGCGCGTGAAGCGGTGA
AAAAACGCGAGGTTGCGGCGCGGACGGATTCTCTGACCGGTCTGCCCAACCGGCGCGCCCTCAAAGACCATATCGAAATG
ACGACTCGTCAGGCGCCGGCCGTGCCGCACGCTCTCCTCCTGATCGAAATCGTCAATATCGCTGATGTCGCGGCCTATCA
GGGCGATGATTGGGCCGATCTCTTCTGGCCAAAACTGGCGCGGGAAATCTGCGATGGTGAGAATGGGCTGTTGTCGAAAT
TTAATGACCCGCGCAGCTTCATGTTCGGCGACGCGACACTTGCGGTTGTCATCGAGGGAGTTTCGCTGGAGAAGTCGGAA
AGCGCCGGCCTCGTCTTGCATCTCCACGAGGGATTGATCGCCTTTTTCCGGTCTGCTGAGGCAGGACCGGTTCCGCATCT
TAAAATCGGGGCGGCTAATCTGGAAATGGTCTCGCACCAGAACGTGGCCTCCTTTCTCAGACATCTCAGCCTGGCGCTGA
GGCGGAGTGAAAATCCCGTGCAGATTTTTCCCTTTTCTTTCGCCGAGAAAGCGGCGCGGGACGAGGGCGTGCGCCAGATG
CTGGTCCGCTGGATCAAAAATGGAAAGCCGCCGATATTTTACCAGCCGAAGTTTGAAATTCACAATCGCCGCATGATCGG
CGCCGAAGCGCTCTTGCGGGCGATCGATACGCATGGGCAGGCGCTTTCGCCCTATTATGTGCTGGAAATTGCCGAACGCC
ACCGGCTGCTCGTGGAATTCGAGTGGTCAACCATCGAAGCGGTGGTCCGCGACCTCGCCGAACTGCCTGGCCTCGATCCG
GATTTTCATCTGGCGGTGAATATTTCCGCCTCGTCTTTTGCGACCGCGTGTTTTGCAGACCGGGTGGTGGCGTTGCTGCA
GGAGATGACGGTGCCTGCGCATCGCCTGTCGATCGAGGTGACGGAGATGAGCAGGATGCCGACCACAGATTCCGTGCAGC
AGAATTTCGATACGTTGATTGCCGCAGGTGTCCGGCTGGCGCTGGATGATTTCGGCACCGGTTATGCCGCGCTCACCCTG
CTGGCAAGATTTCCCTTCGAGGAGGTCAAGATCGATCAATGGATGACATCCCGGCTCGATCAGGCACGGTTCAGGGACGC
CGTCGTGCTCGCCTTCGAAAGCGCCGAGCGCTACGGCGCCAAGCTTGTAACGGAAGGCATAGAAACCGAAGAACAGTGCC
GGATTCTCATGCAAATGGGCATTCGTTTCGGTCAGGGTTATCTTTATTCGCCCGCCGTGCCGCTTGATCGGTTGCTGCCC
CGCCGGGCATACGCCTAG

Upstream 100 bases:

>100_bases
ATGGTGGTAATCTTATACTTTCCCTGCGTAGCAGTGGGATTTTTGATTGCCAGATGCTGAAGTTCCGGTGCCGGCGCCGA
TATTTTACGGTGAATCGCAG

Downstream 100 bases:

>100_bases
CGCGTCGGGAACCTCACCGGCCAATGGCGAGGGCATGAATTCCGTCGTAGCCGGATTGAATGTTTCCCCGGTCTGTGCTG
AGGAATGTTCCTTGACGAAC

Product: GGDEF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MMELIVAQAAASAAELPFLLLQAAAVVGMVSMLMLLQRHIAFDDVRYKIYYGVVFGATGFLLTLLVSEFIQLPSKPYIRS
DLLFLAGVVGSWQGGLISLALISAGRFLFGGPALFGAAFLDMSVISAFGIAIYGWMRRRRLTELGMREIAGVFAIRIFAA
LFAICLTYGLGMVGQDVFLSNVGRRIVGATVGLPMIACLFLLLRSEARAREAVKKREVAARTDSLTGLPNRRALKDHIEM
TTRQAPAVPHALLLIEIVNIADVAAYQGDDWADLFWPKLAREICDGENGLLSKFNDPRSFMFGDATLAVVIEGVSLEKSE
SAGLVLHLHEGLIAFFRSAEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLALRRSENPVQIFPFSFAEKAARDEGVRQM
LVRWIKNGKPPIFYQPKFEIHNRRMIGAEALLRAIDTHGQALSPYYVLEIAERHRLLVEFEWSTIEAVVRDLAELPGLDP
DFHLAVNISASSFATACFADRVVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAALTL
LARFPFEEVKIDQWMTSRLDQARFRDAVVLAFESAERYGAKLVTEGIETEEQCRILMQMGIRFGQGYLYSPAVPLDRLLP
RRAYA

Sequences:

>Translated_645_residues
MMELIVAQAAASAAELPFLLLQAAAVVGMVSMLMLLQRHIAFDDVRYKIYYGVVFGATGFLLTLLVSEFIQLPSKPYIRS
DLLFLAGVVGSWQGGLISLALISAGRFLFGGPALFGAAFLDMSVISAFGIAIYGWMRRRRLTELGMREIAGVFAIRIFAA
LFAICLTYGLGMVGQDVFLSNVGRRIVGATVGLPMIACLFLLLRSEARAREAVKKREVAARTDSLTGLPNRRALKDHIEM
TTRQAPAVPHALLLIEIVNIADVAAYQGDDWADLFWPKLAREICDGENGLLSKFNDPRSFMFGDATLAVVIEGVSLEKSE
SAGLVLHLHEGLIAFFRSAEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLALRRSENPVQIFPFSFAEKAARDEGVRQM
LVRWIKNGKPPIFYQPKFEIHNRRMIGAEALLRAIDTHGQALSPYYVLEIAERHRLLVEFEWSTIEAVVRDLAELPGLDP
DFHLAVNISASSFATACFADRVVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAALTL
LARFPFEEVKIDQWMTSRLDQARFRDAVVLAFESAERYGAKLVTEGIETEEQCRILMQMGIRFGQGYLYSPAVPLDRLLP
RRAYA
>Mature_645_residues
MMELIVAQAAASAAELPFLLLQAAAVVGMVSMLMLLQRHIAFDDVRYKIYYGVVFGATGFLLTLLVSEFIQLPSKPYIRS
DLLFLAGVVGSWQGGLISLALISAGRFLFGGPALFGAAFLDMSVISAFGIAIYGWMRRRRLTELGMREIAGVFAIRIFAA
LFAICLTYGLGMVGQDVFLSNVGRRIVGATVGLPMIACLFLLLRSEARAREAVKKREVAARTDSLTGLPNRRALKDHIEM
TTRQAPAVPHALLLIEIVNIADVAAYQGDDWADLFWPKLAREICDGENGLLSKFNDPRSFMFGDATLAVVIEGVSLEKSE
SAGLVLHLHEGLIAFFRSAEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLALRRSENPVQIFPFSFAEKAARDEGVRQM
LVRWIKNGKPPIFYQPKFEIHNRRMIGAEALLRAIDTHGQALSPYYVLEIAERHRLLVEFEWSTIEAVVRDLAELPGLDP
DFHLAVNISASSFATACFADRVVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAALTL
LARFPFEEVKIDQWMTSRLDQARFRDAVVLAFESAERYGAKLVTEGIETEEQCRILMQMGIRFGQGYLYSPAVPLDRLLP
RRAYA

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=256, Percent_Identity=32.03125, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1786507, Length=230, Percent_Identity=32.1739130434783, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1787541, Length=481, Percent_Identity=25.1559251559252, Blast_Score=115, Evalue=9e-27,
Organism=Escherichia coli, GI1790496, Length=238, Percent_Identity=29.8319327731092, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI87081743, Length=237, Percent_Identity=29.1139240506329, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1788502, Length=236, Percent_Identity=32.2033898305085, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI1787055, Length=296, Percent_Identity=27.027027027027, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI87081921, Length=449, Percent_Identity=27.1714922048998, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI87081980, Length=231, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI87082096, Length=453, Percent_Identity=23.3995584988962, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI226510982, Length=297, Percent_Identity=26.5993265993266, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788849, Length=208, Percent_Identity=29.3269230769231, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 71373; Mature: 71373

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMELIVAQAAASAAELPFLLLQAAAVVGMVSMLMLLQRHIAFDDVRYKIYYGVVFGATGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEHHHHHHHH
LLTLLVSEFIQLPSKPYIRSDLLFLAGVVGSWQGGLISLALISAGRFLFGGPALFGAAFL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCHHHHHHHHH
DMSVISAFGIAIYGWMRRRRLTELGMREIAGVFAIRIFAALFAICLTYGLGMVGQDVFLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NVGRRIVGATVGLPMIACLFLLLRSEARAREAVKKREVAARTDSLTGLPNRRALKDHIEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
TTRQAPAVPHALLLIEIVNIADVAAYQGDDWADLFWPKLAREICDGENGLLSKFNDPRSF
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC
MFGDATLAVVIEGVSLEKSESAGLVLHLHEGLIAFFRSAEAGPVPHLKIGAANLEMVSHQ
EECCEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH
NVASFLRHLSLALRRSENPVQIFPFSFAEKAARDEGVRQMLVRWIKNGKPPIFYQPKFEI
HHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHC
HNRRMIGAEALLRAIDTHGQALSPYYVLEIAERHRLLVEFEWSTIEAVVRDLAELPGLDP
CCCEEHHHHHHHHHHHCCCCCCCCHHHEEEHHCCCEEEEECHHHHHHHHHHHHHCCCCCC
DFHLAVNISASSFATACFADRVVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLI
CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHCCCCCCHHHHHHHHHHH
AAGVRLALDDFGTGYAALTLLARFPFEEVKIDQWMTSRLDQARFRDAVVLAFESAERYGA
HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHH
KLVTEGIETEEQCRILMQMGIRFGQGYLYSPAVPLDRLLPRRAYA
HHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCC
>Mature Secondary Structure
MMELIVAQAAASAAELPFLLLQAAAVVGMVSMLMLLQRHIAFDDVRYKIYYGVVFGATGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEHHHHHHHH
LLTLLVSEFIQLPSKPYIRSDLLFLAGVVGSWQGGLISLALISAGRFLFGGPALFGAAFL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCHHHHHHHHH
DMSVISAFGIAIYGWMRRRRLTELGMREIAGVFAIRIFAALFAICLTYGLGMVGQDVFLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NVGRRIVGATVGLPMIACLFLLLRSEARAREAVKKREVAARTDSLTGLPNRRALKDHIEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
TTRQAPAVPHALLLIEIVNIADVAAYQGDDWADLFWPKLAREICDGENGLLSKFNDPRSF
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC
MFGDATLAVVIEGVSLEKSESAGLVLHLHEGLIAFFRSAEAGPVPHLKIGAANLEMVSHQ
EECCEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH
NVASFLRHLSLALRRSENPVQIFPFSFAEKAARDEGVRQMLVRWIKNGKPPIFYQPKFEI
HHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHC
HNRRMIGAEALLRAIDTHGQALSPYYVLEIAERHRLLVEFEWSTIEAVVRDLAELPGLDP
CCCEEHHHHHHHHHHHCCCCCCCCHHHEEEHHCCCEEEEECHHHHHHHHHHHHHCCCCCC
DFHLAVNISASSFATACFADRVVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLI
CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHCCCCCCHHHHHHHHHHH
AAGVRLALDDFGTGYAALTLLARFPFEEVKIDQWMTSRLDQARFRDAVVLAFESAERYGA
HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHH
KLVTEGIETEEQCRILMQMGIRFGQGYLYSPAVPLDRLLPRRAYA
HHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]