Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cusR [H]
Identifier: 159184556
GI number: 159184556
Start: 958852
End: 959523
Strand: Direct
Name: cusR [H]
Synonym: Atu0970
Alternate gene names: 159184556
Gene position: 958852-959523 (Clockwise)
Preceding gene: 15888312
Following gene: 15888314
Centisome position: 33.74
GC content: 59.97
Gene sequence:
>672_bases ATGCGTATTCTCGTTGTTGAGGACGATGCCAATCTCAATCGTCAGCTGACCGACGCCCTGAAAGAGGCCGGTTATGTCGT CGATCAGGCATTCGACGGCGAAGAGGGGCATTACCTCGGCGACACCGAGCCCTATGACGCCATCGTCCTCGATATCGGCC TGCCGCAACTGGATGGCATTACCGTCGTTGAAAAATGGCGTGCCGCCGGCAAGGCCATGCCGGTCCTCATCCTTACCGCC CGCGACCGCTGGAGCGACAAGGTGGCGGGCATCGATGCCGGTGCCGATGACTACGTGACCAAGCCTTTCCATGTCGAAGA AGTGCTTGCCCGCGTGCGCGCGCTCATCCGCCGCGCCGCTGGCCATGCCTCTTCCGAACTGGTCTGCGGCCCGGTCCGGC TCGACACCAAATCCTCCAAGGCGACCGTCAACGGCACGACGCTGAAACTCACCTCGCATGAGTTCCGGCTCCTGTCCTAT CTCATGCATCACATGGGCGAGGTCGTTTCGCGCACGGAGCTGGTCGAACATATGTACGATCAGGATTTCGACCGCGATTC CAACACGATCGAGGTGTTTGTCGGACGTTTGCGCAAGAAGATCGGAGTTGATCTGATCGAGACGATCCGCGGTCTCGGTT ACCGGATGCAAGCGCCGGCAGATGCGAAGTAA
Upstream 100 bases:
>100_bases GATGTAGCTTGCCCGCATCGCCGAAATATCGGAAAACAACCCGACACATGTAGCATGACCGGCCACCTGCGTGGGCCGGG ACGGAAGGAAAGGGCGGACA
Downstream 100 bases:
>100_bases CTCTCTCACCGCCCGCGTTCTGCTGCTCGCCTCTGCCTGGTCGGCGCTGGCGCTTGTCGTGATCGCCGTCGTGATTTCGA CGCTTTACCGCCAGGGCGTG
Product: two component response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MRILVVEDDANLNRQLTDALKEAGYVVDQAFDGEEGHYLGDTEPYDAIVLDIGLPQLDGITVVEKWRAAGKAMPVLILTA RDRWSDKVAGIDAGADDYVTKPFHVEEVLARVRALIRRAAGHASSELVCGPVRLDTKSSKATVNGTTLKLTSHEFRLLSY LMHHMGEVVSRTELVEHMYDQDFDRDSNTIEVFVGRLRKKIGVDLIETIRGLGYRMQAPADAK
Sequences:
>Translated_223_residues MRILVVEDDANLNRQLTDALKEAGYVVDQAFDGEEGHYLGDTEPYDAIVLDIGLPQLDGITVVEKWRAAGKAMPVLILTA RDRWSDKVAGIDAGADDYVTKPFHVEEVLARVRALIRRAAGHASSELVCGPVRLDTKSSKATVNGTTLKLTSHEFRLLSY LMHHMGEVVSRTELVEHMYDQDFDRDSNTIEVFVGRLRKKIGVDLIETIRGLGYRMQAPADAK >Mature_223_residues MRILVVEDDANLNRQLTDALKEAGYVVDQAFDGEEGHYLGDTEPYDAIVLDIGLPQLDGITVVEKWRAAGKAMPVLILTA RDRWSDKVAGIDAGADDYVTKPFHVEEVLARVRALIRRAAGHASSELVCGPVRLDTKSSKATVNGTTLKLTSHEFRLLSY LMHHMGEVVSRTELVEHMYDQDFDRDSNTIEVFVGRLRKKIGVDLIETIRGLGYRMQAPADAK
Specific function: Member of the two-component regulatory system CusS/CusR. Activates the expression of cusCFBA in response to increasing levels of copper ions, and probably silver ions [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=42.6605504587156, Blast_Score=187, Evalue=5e-49, Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=44.6428571428571, Blast_Score=186, Evalue=1e-48, Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=43.9814814814815, Blast_Score=177, Evalue=4e-46, Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=40.990990990991, Blast_Score=166, Evalue=1e-42, Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=41.2844036697248, Blast_Score=161, Evalue=4e-41, Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=34.9775784753363, Blast_Score=123, Evalue=8e-30, Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=34.070796460177, Blast_Score=123, Evalue=9e-30, Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=35.4260089686099, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=33.7837837837838, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=34.6491228070175, Blast_Score=110, Evalue=6e-26, Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=31.5789473684211, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=28.5087719298246, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=34.2592592592593, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=25.764192139738, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=33.0508474576271, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR006291 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 24807; Mature: 24807
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILVVEDDANLNRQLTDALKEAGYVVDQAFDGEEGHYLGDTEPYDAIVLDIGLPQLDGI CEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCH TVVEKWRAAGKAMPVLILTARDRWSDKVAGIDAGADDYVTKPFHVEEVLARVRALIRRAA HHHHHHHHCCCCCCEEEEECCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GHASSELVCGPVRLDTKSSKATVNGTTLKLTSHEFRLLSYLMHHMGEVVSRTELVEHMYD CCCCCCEEECCEEECCCCCCEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDFDRDSNTIEVFVGRLRKKIGVDLIETIRGLGYRMQAPADAK CCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCEEECCCCCCC >Mature Secondary Structure MRILVVEDDANLNRQLTDALKEAGYVVDQAFDGEEGHYLGDTEPYDAIVLDIGLPQLDGI CEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCH TVVEKWRAAGKAMPVLILTARDRWSDKVAGIDAGADDYVTKPFHVEEVLARVRALIRRAA HHHHHHHHCCCCCCEEEEECCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GHASSELVCGPVRLDTKSSKATVNGTTLKLTSHEFRLLSYLMHHMGEVVSRTELVEHMYD CCCCCCEEECCEEECCCCCCEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDFDRDSNTIEVFVGRLRKKIGVDLIETIRGLGYRMQAPADAK CCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]