Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184528
Identifier: 159184528
GI number: 159184528
Start: 906032
End: 906454
Strand: Direct
Name: 159184528
Synonym: Atu0917
Alternate gene names: NA
Gene position: 906032-906454 (Clockwise)
Preceding gene: 15888254
Following gene: 15888256
Centisome position: 31.88
GC content: 63.36
Gene sequence:
>423_bases ATGCCGTCGGATACATTGCTTCTGTCTGCCGCCGCGCGGCCTCGCATGCAGGCTGTCGATCGCCCTTTCCGTCACTGGCC GCCGGTTGCCGGACGGGAGGAGATTGCCCGTCTTTGCCGTCTGGTGCGGCAGCTCACCGGGGAGATGGTGCAATTGACGG GTGATCGCTTTGCGGCGCGTCGCGACCGCCGACGCATCGAATGCCACATCCGTCAGATCGCGATGTATGTCTGCCATGTC GCGCTCGGCATCCCCATGTCGGATATCGGCCCCTGTTTTGGCCGGGACAGAACGACGGTGGGCCATGCCTGCCAGGTGGT CGAGGACCGGCGTGACGAGCCGGCCTTTGATGAGTTCGTCGCCGTGCTGGAGCGGCTTGTCGTCGGCATTTTCAGCGTGA TGAAAGGAGGAAGGGATGAATGA
Upstream 100 bases:
>100_bases TGATGTGAAATCAATTGGTATATTTGCGGGGGCAAATTCTTACTTCCCCGCATCCGTCCACAGGTGTATGAATTAATTCC TATTCGTAGAGGAGTTGCAT
Downstream 100 bases:
>100_bases ACTGAAAAACGCCCAGACCGCTTCGGCTCATCGCATCCTGCTGCCGCTTCTGCGTTGTATCGCGTCCGGTGCGGCTGATG TCACCGAGGAGGGGAACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase Involved In DNA Replication Initiation
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPSDTLLLSAAARPRMQAVDRPFRHWPPVAGREEIARLCRLVRQLTGEMVQLTGDRFAARRDRRRIECHIRQIAMYVCHV ALGIPMSDIGPCFGRDRTTVGHACQVVEDRRDEPAFDEFVAVLERLVVGIFSVMKGGRDE
Sequences:
>Translated_140_residues MPSDTLLLSAAARPRMQAVDRPFRHWPPVAGREEIARLCRLVRQLTGEMVQLTGDRFAARRDRRRIECHIRQIAMYVCHV ALGIPMSDIGPCFGRDRTTVGHACQVVEDRRDEPAFDEFVAVLERLVVGIFSVMKGGRDE >Mature_139_residues PSDTLLLSAAARPRMQAVDRPFRHWPPVAGREEIARLCRLVRQLTGEMVQLTGDRFAARRDRRRIECHIRQIAMYVCHVA LGIPMSDIGPCFGRDRTTVGHACQVVEDRRDEPAFDEFVAVLERLVVGIFSVMKGGRDE
Specific function: Unknown
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15901; Mature: 15770
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSDTLLLSAAARPRMQAVDRPFRHWPPVAGREEIARLCRLVRQLTGEMVQLTGDRFAAR CCCCHHHHHHHCCHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDRRRIECHIRQIAMYVCHVALGIPMSDIGPCFGRDRTTVGHACQVVEDRRDEPAFDEFV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHCCCCCCHHHHHHHHHHHCCCCCCHHHHH AVLERLVVGIFSVMKGGRDE HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PSDTLLLSAAARPRMQAVDRPFRHWPPVAGREEIARLCRLVRQLTGEMVQLTGDRFAAR CCCHHHHHHHCCHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDRRRIECHIRQIAMYVCHVALGIPMSDIGPCFGRDRTTVGHACQVVEDRRDEPAFDEFV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHCCCCCCHHHHHHHHHHHCCCCCCHHHHH AVLERLVVGIFSVMKGGRDE HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA