Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888256
Identifier: 15888256
GI number: 15888256
Start: 906447
End: 907283
Strand: Direct
Name: 15888256
Synonym: Atu0918
Alternate gene names: NA
Gene position: 906447-907283 (Clockwise)
Preceding gene: 159184528
Following gene: 159184529
Centisome position: 31.9
GC content: 64.87
Gene sequence:
>837_bases ATGAATGAACTGAAAAACGCCCAGACCGCTTCGGCTCATCGCATCCTGCTGCCGCTTCTGCGTTGTATCGCGTCCGGTGC GGCTGATGTCACCGAGGAGGGGAACGAGATCGTCCTGCGCCGCAAGCGCCCGGGGCAGGCAGTTCAGCGGTTTCCGACCG AGACGGTGCGGCTTGCCGTTTCCTCGGGCTTGCTGGAGTGGCGGCAGAACAGCCTTTCCGCCGCACCGCCGCTTGCCTCC TATCTGAAACGGGCCACGGCAAAGGACCGGGACGAGGTGTTTCAGGAGCAGCACCGGGATATACAGACCGTCGTGGTTGA GATCGACGAAACGAAACAGCCGGCCCGGCGCAACCTCAACACCGCGCCGCTCACCAGCCTTTCACGATTGAAGGAGCGGG ATGGCAGCGCATTTTTTCCTGAAGACGCGCTGGCGGCGGGCGAGCGCCTCGCTGCCGATTTTCATCGCGGCCATCTCAAT CCCAGGGTCACGGCGACGTGGGAACCGCGCATTGCCAGTCGCGGCAAGGGGGAGGCGGGAGGCGCCCTTGATCTCACCGA AGCTGCAATGGCCGCAAGGGCGCGGTTTTCCCGCGCGGCGGATGCGATGGGCCCGGAACTTTCGGGCGTCGCCATCGATA TCTGCTGCTTCGAAAAGGGGCTGGAGACGGTGGAGCGGGAAAGACTATGGCCGGCGCGCTCGGCGAAATTACTGCTCAGG GCAGCGCTGCTCTCGCTCGCCCGCCACTACGCGCCGCCTGTTCCCCCTGCGCGGGGCAAGGATCGCCCCAAGGAACGCCA TTGGGGCGACGCGGACTATCGCCCTTCTCTCAGATAG
Upstream 100 bases:
>100_bases GTGGTCGAGGACCGGCGTGACGAGCCGGCCTTTGATGAGTTCGTCGCCGTGCTGGAGCGGCTTGTCGTCGGCATTTTCAG CGTGATGAAAGGAGGAAGGG
Downstream 100 bases:
>100_bases GGATGGCAAGGGGGTGAGGGCTCAGGCCGCCAGCAGCCGGGCTTCGTCGCGGATGCGCTTGATCATCGAGCGCAGGCCAT TGGCGCGCTGTGCGGAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNELKNAQTASAHRILLPLLRCIASGAADVTEEGNEIVLRRKRPGQAVQRFPTETVRLAVSSGLLEWRQNSLSAAPPLAS YLKRATAKDRDEVFQEQHRDIQTVVVEIDETKQPARRNLNTAPLTSLSRLKERDGSAFFPEDALAAGERLAADFHRGHLN PRVTATWEPRIASRGKGEAGGALDLTEAAMAARARFSRAADAMGPELSGVAIDICCFEKGLETVERERLWPARSAKLLLR AALLSLARHYAPPVPPARGKDRPKERHWGDADYRPSLR
Sequences:
>Translated_278_residues MNELKNAQTASAHRILLPLLRCIASGAADVTEEGNEIVLRRKRPGQAVQRFPTETVRLAVSSGLLEWRQNSLSAAPPLAS YLKRATAKDRDEVFQEQHRDIQTVVVEIDETKQPARRNLNTAPLTSLSRLKERDGSAFFPEDALAAGERLAADFHRGHLN PRVTATWEPRIASRGKGEAGGALDLTEAAMAARARFSRAADAMGPELSGVAIDICCFEKGLETVERERLWPARSAKLLLR AALLSLARHYAPPVPPARGKDRPKERHWGDADYRPSLR >Mature_278_residues MNELKNAQTASAHRILLPLLRCIASGAADVTEEGNEIVLRRKRPGQAVQRFPTETVRLAVSSGLLEWRQNSLSAAPPLAS YLKRATAKDRDEVFQEQHRDIQTVVVEIDETKQPARRNLNTAPLTSLSRLKERDGSAFFPEDALAAGERLAADFHRGHLN PRVTATWEPRIASRGKGEAGGALDLTEAAMAARARFSRAADAMGPELSGVAIDICCFEKGLETVERERLWPARSAKLLLR AALLSLARHYAPPVPPARGKDRPKERHWGDADYRPSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30704; Mature: 30704
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELKNAQTASAHRILLPLLRCIASGAADVTEEGNEIVLRRKRPGQAVQRFPTETVRLAV CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCCHHHHHCCHHHHHHHH SSGLLEWRQNSLSAAPPLASYLKRATAKDRDEVFQEQHRDIQTVVVEIDETKQPARRNLN HHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEEECCCCCHHHHCCC TAPLTSLSRLKERDGSAFFPEDALAAGERLAADFHRGHLNPRVTATWEPRIASRGKGEAG CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCC GALDLTEAAMAARARFSRAADAMGPELSGVAIDICCFEKGLETVERERLWPARSAKLLLR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHH AALLSLARHYAPPVPPARGKDRPKERHWGDADYRPSLR HHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure MNELKNAQTASAHRILLPLLRCIASGAADVTEEGNEIVLRRKRPGQAVQRFPTETVRLAV CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCCHHHHHCCHHHHHHHH SSGLLEWRQNSLSAAPPLASYLKRATAKDRDEVFQEQHRDIQTVVVEIDETKQPARRNLN HHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEEECCCCCHHHHCCC TAPLTSLSRLKERDGSAFFPEDALAAGERLAADFHRGHLNPRVTATWEPRIASRGKGEAG CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCC GALDLTEAAMAARARFSRAADAMGPELSGVAIDICCFEKGLETVERERLWPARSAKLLLR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHH AALLSLARHYAPPVPPARGKDRPKERHWGDADYRPSLR HHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA