Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yeiH [C]
Identifier: 159184416
GI number: 159184416
Start: 667418
End: 668335
Strand: Reverse
Name: yeiH [C]
Synonym: Atu0671
Alternate gene names: 159184416
Gene position: 668335-667418 (Counterclockwise)
Preceding gene: 15888016
Following gene: 159184414
Centisome position: 23.52
GC content: 62.42
Gene sequence:
>918_bases GTGCGGATTGCGGGTCACGCCTGGCTTGGCGATCTGGTGCTTGCCATCCTGATCGGTACGCTTTTGCGTTCGTTGGTGTC GCTGCCTGTAGTCGCGTCGGCGGGTATAAAGTTCAGTGCCAAGACCCTGCTTGAAATCGCGGTGGCGCTTCTCGGCGCAT CCTTGAGTCTTTCCATTCTCAAGGGCGCTGGCGGCTTACTGATTGGCGGCATCGCGCTGATCGTGGCGCTGTCGCTGGTC TTCAGCTATGCCGCCGGGCGGATGCTAGGCCTGCCGCCCAAGCTTGCGACGCTGATCGCCTGCGGCAATTCCATCTGCGG CAATTCCGCCATTGCTGCTGCTGCGCCCGCCATCGGCGCCAAGCCGGAAGATGTCGCCGCCTCGATCGCCTTCACCGCGG TTCTCGGCGTTGTCGCCGTGTTGCTGATGCCTTTTCTACCGCAGCTGCTTGGCCTTGATGCGACCCAATATGGCATCTTC GCCGGCCTCACGGTCTATGCCGTGCCCCAAGTTCTGGCCGCCACCGCACCGCTTGGAGCCGTGGCCGTGCAGACGGGCAC CATCGTCAAGCTCATCCGCGTGCTGATGCTGGGTCCGGTCATCGCCACTCTCTCCGTCATCCACGGTCAGTCCGGCAAGG GACGCCTGAAGCTGCAACAGATGGTTCCGTGGTTCATCATCGGTTTCGTGCTGATGATCATGGCGCGCTCCTTCGGCCTC ATCCCCGAGGCGCTGCTTTCCCCCGTAGCCTCGCTCTCCAACATCCTCACCATCATGTCGATGGCGGCTCTCGGACTATC GGTCGATATTCGCAGTCTTCGCCATGCCGGTGGCAAGGTCATCATTGCCGCCAGCCTGTCGCTCGTGTTGCTGGGTGTTC TGAGCTTCGGCCTGATCCTGCTGACGCAGGCGGCCTGA
Upstream 100 bases:
>100_bases TCCGTTTCAGTTTTCGCTCCGCTGGCTCAGCCCGCTTCTGCCGGGCATTCTCATCTGCGCGGCAGTTAGCTGCGCCGCCA TTCTGGCAGAGCGTTTTCAG
Downstream 100 bases:
>100_bases GCAGCCTAGGTCTTGCTGCTGAGCTTTATTTACCGGTGCTGACCGTCAATATGTAATGCGCGCCGAGCCCACGCCGCGGA GAACCCAGGATCAACGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MRIAGHAWLGDLVLAILIGTLLRSLVSLPVVASAGIKFSAKTLLEIAVALLGASLSLSILKGAGGLLIGGIALIVALSLV FSYAAGRMLGLPPKLATLIACGNSICGNSAIAAAAPAIGAKPEDVAASIAFTAVLGVVAVLLMPFLPQLLGLDATQYGIF AGLTVYAVPQVLAATAPLGAVAVQTGTIVKLIRVLMLGPVIATLSVIHGQSGKGRLKLQQMVPWFIIGFVLMIMARSFGL IPEALLSPVASLSNILTIMSMAALGLSVDIRSLRHAGGKVIIAASLSLVLLGVLSFGLILLTQAA
Sequences:
>Translated_305_residues MRIAGHAWLGDLVLAILIGTLLRSLVSLPVVASAGIKFSAKTLLEIAVALLGASLSLSILKGAGGLLIGGIALIVALSLV FSYAAGRMLGLPPKLATLIACGNSICGNSAIAAAAPAIGAKPEDVAASIAFTAVLGVVAVLLMPFLPQLLGLDATQYGIF AGLTVYAVPQVLAATAPLGAVAVQTGTIVKLIRVLMLGPVIATLSVIHGQSGKGRLKLQQMVPWFIIGFVLMIMARSFGL IPEALLSPVASLSNILTIMSMAALGLSVDIRSLRHAGGKVIIAASLSLVLLGVLSFGLILLTQAA >Mature_305_residues MRIAGHAWLGDLVLAILIGTLLRSLVSLPVVASAGIKFSAKTLLEIAVALLGASLSLSILKGAGGLLIGGIALIVALSLV FSYAAGRMLGLPPKLATLIACGNSICGNSAIAAAAPAIGAKPEDVAASIAFTAVLGVVAVLLMPFLPQLLGLDATQYGIF AGLTVYAVPQVLAATAPLGAVAVQTGTIVKLIRVLMLGPVIATLSVIHGQSGKGRLKLQQMVPWFIIGFVLMIMARSFGL IPEALLSPVASLSNILTIMSMAALGLSVDIRSLRHAGGKVIIAASLSLVLLGVLSFGLILLTQAA
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=280, Percent_Identity=31.0714285714286, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 30861; Mature: 30861
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAGHAWLGDLVLAILIGTLLRSLVSLPVVASAGIKFSAKTLLEIAVALLGASLSLSIL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHH KGAGGLLIGGIALIVALSLVFSYAAGRMLGLPPKLATLIACGNSICGNSAIAAAAPAIGA HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCC KPEDVAASIAFTAVLGVVAVLLMPFLPQLLGLDATQYGIFAGLTVYAVPQVLAATAPLGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH VAVQTGTIVKLIRVLMLGPVIATLSVIHGQSGKGRLKLQQMVPWFIIGFVLMIMARSFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC IPEALLSPVASLSNILTIMSMAALGLSVDIRSLRHAGGKVIIAASLSLVLLGVLSFGLIL CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH LTQAA HHCCC >Mature Secondary Structure MRIAGHAWLGDLVLAILIGTLLRSLVSLPVVASAGIKFSAKTLLEIAVALLGASLSLSIL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHH KGAGGLLIGGIALIVALSLVFSYAAGRMLGLPPKLATLIACGNSICGNSAIAAAAPAIGA HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCC KPEDVAASIAFTAVLGVVAVLLMPFLPQLLGLDATQYGIFAGLTVYAVPQVLAATAPLGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH VAVQTGTIVKLIRVLMLGPVIATLSVIHGQSGKGRLKLQQMVPWFIIGFVLMIMARSFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC IPEALLSPVASLSNILTIMSMAALGLSVDIRSLRHAGGKVIIAASLSLVLLGVLSFGLIL CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH LTQAA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]