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The map label for this gene is erfK [H]

Identifier: 159184414

GI number: 159184414

Start: 665308

End: 666084

Strand: Reverse

Name: erfK [H]

Synonym: Atu0669

Alternate gene names: 159184414

Gene position: 666084-665308 (Counterclockwise)

Preceding gene: 159184416

Following gene: 15888010

Centisome position: 23.44

GC content: 65.51

Gene sequence:

>777_bases
ATGCCGATGAAGTCCGTTTTTCTGGCGCTGAGCCTCGTTTCCACCCTCGCCGTCCCGGCCGCGATGGCCAATGAGCGGTA
TCGCGAGCGCCCGCCCGTCGTCGTCAGCCCGGACCTTTCCGCCCCCTGGGTTACCCAGCTTGGCGGCCGCAGCAATGTGC
GCCCCGTGGTTTATCCGCGCGCGCCTGCCGCCCGCCAGCCGCTGTTCCAGCAGCGTCAGGTCGCCATGCCGCAGCGCCCC
AGTTCCGGCGTCACATCGCAGCGTCCGGCGCGGGTGCAGAATGCCGCCGTGCGCCCCAACGCACCGATGCGCACTCAGAT
CGCGCCGCAATTCCTGCCGCAGATCGTCAGCTATCAGACCGCCGAAAAACCCGGCACCATCGTCATCGATACGCCGAACC
GCTTCCTCTATCTCGTCCTCGCCGATGGCAAGGCCCGGCGTTACGGCGTCGGCGTCGGCAAGCCCGGCTTTGAATGGGCC
GGAACCCACAAAGTGACCCGCAAGGCAGAATGGCCAAGCTGGACCCCACCGAAGGAAATGATCAGCCGCGAGGCGACCAA
GGGACACTACCTGCCGGCCTTCATGGAAGGCGGCCCGGCCAACCCCATGGGCGCACGCGCCATGTATCTCGGCTCGACGC
TTTACCGCATCCACGGCACCAACCAGCCCTGGACGATCGGCAGCAACAATTCCTCCGGCTGCATCCGCATGCGCAACGAG
GATGTCACCGATCTTTACGAGCGCGTCAACGTCGGAACCAGGGTCATAGTGATATGA

Upstream 100 bases:

>100_bases
TTACGATTCGCTGGCGTGGAGGTGCGAACGTATCCGGCAAAGCGGGTGAATGATCCCGCGATTTCCATTGTTGCGACATC
CCGCAGAGAGAGTCCACCCG

Downstream 100 bases:

>100_bases
CAGCAACGGTTCGGCCATTCCGGACGTAGTAAGGCCGGCATAAGGTCTTATCCGCTTGAATTGCTGTCTCGCAGCGGTAC
AATCCTCACTTGAATTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MPMKSVFLALSLVSTLAVPAAMANERYRERPPVVVSPDLSAPWVTQLGGRSNVRPVVYPRAPAARQPLFQQRQVAMPQRP
SSGVTSQRPARVQNAAVRPNAPMRTQIAPQFLPQIVSYQTAEKPGTIVIDTPNRFLYLVLADGKARRYGVGVGKPGFEWA
GTHKVTRKAEWPSWTPPKEMISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYRIHGTNQPWTIGSNNSSGCIRMRNE
DVTDLYERVNVGTRVIVI

Sequences:

>Translated_258_residues
MPMKSVFLALSLVSTLAVPAAMANERYRERPPVVVSPDLSAPWVTQLGGRSNVRPVVYPRAPAARQPLFQQRQVAMPQRP
SSGVTSQRPARVQNAAVRPNAPMRTQIAPQFLPQIVSYQTAEKPGTIVIDTPNRFLYLVLADGKARRYGVGVGKPGFEWA
GTHKVTRKAEWPSWTPPKEMISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYRIHGTNQPWTIGSNNSSGCIRMRNE
DVTDLYERVNVGTRVIVI
>Mature_257_residues
PMKSVFLALSLVSTLAVPAAMANERYRERPPVVVSPDLSAPWVTQLGGRSNVRPVVYPRAPAARQPLFQQRQVAMPQRPS
SGVTSQRPARVQNAAVRPNAPMRTQIAPQFLPQIVSYQTAEKPGTIVIDTPNRFLYLVLADGKARRYGVGVGKPGFEWAG
THKVTRKAEWPSWTPPKEMISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYRIHGTNQPWTIGSNNSSGCIRMRNED
VTDLYERVNVGTRVIVI

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=151, Percent_Identity=39.7350993377483, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1787040, Length=113, Percent_Identity=46.9026548672566, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787356, Length=116, Percent_Identity=37.9310344827586, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787968, Length=141, Percent_Identity=36.1702127659575, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 28490; Mature: 28359

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMKSVFLALSLVSTLAVPAAMANERYRERPPVVVSPDLSAPWVTQLGGRSNVRPVVYPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCEEEECC
APAARQPLFQQRQVAMPQRPSSGVTSQRPARVQNAAVRPNAPMRTQIAPQFLPQIVSYQT
CCHHHCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHC
AEKPGTIVIDTPNRFLYLVLADGKARRYGVGVGKPGFEWAGTHKVTRKAEWPSWTPPKEM
CCCCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHHH
ISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYRIHGTNQPWTIGSNNSSGCIRMRNE
HHHHCCCCCCCCHHCCCCCCCCCCCEEHHHCCEEEEEECCCCCEEECCCCCCCEEEECCC
DVTDLYERVNVGTRVIVI
CHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
PMKSVFLALSLVSTLAVPAAMANERYRERPPVVVSPDLSAPWVTQLGGRSNVRPVVYPR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCEEEECC
APAARQPLFQQRQVAMPQRPSSGVTSQRPARVQNAAVRPNAPMRTQIAPQFLPQIVSYQT
CCHHHCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHC
AEKPGTIVIDTPNRFLYLVLADGKARRYGVGVGKPGFEWAGTHKVTRKAEWPSWTPPKEM
CCCCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHHH
ISREATKGHYLPAFMEGGPANPMGARAMYLGSTLYRIHGTNQPWTIGSNNSSGCIRMRNE
HHHHCCCCCCCCHHCCCCCCCCCCCEEHHHCCEEEEEECCCCCEEECCCCCCCEEEECCC
DVTDLYERVNVGTRVIVI
CHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]