Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184327
Identifier: 159184327
GI number: 159184327
Start: 463379
End: 464083
Strand: Direct
Name: 159184327
Synonym: Atu0475
Alternate gene names: NA
Gene position: 463379-464083 (Clockwise)
Preceding gene: 159184326
Following gene: 15887822
Centisome position: 16.31
GC content: 58.3
Gene sequence:
>705_bases ATGACATATGATCAAAAAGACATTCCCGCCATTGCCGATGACTATGTATTGGGGCTGCTCGAGGCGTCCGAGGCTGCTGC TATCGAAACGGCAACGGAGCGGGACGGCGAATTACGGGCGGCAATCGCGGCAAGCCGCGAGCGTTTTCTACCGCTTGATA CCAGCGTTGCGCCCGCAGCCGTCAACAGTGAATTATGGAGCAATATCGAAAGCCGGTTGCCGCCGCAGGCGAAATTCACG GCCAATAAGTCTACCCGCACCGCAAACGACAATAGAAAAAACGGATGGCGGTCGATCGCCGTTTCCGCAATTGCCGCAAC CCTCGTTCTTGCCGCGGGGCTGACCTTCAGCCTGACACGCACAACGGAGCCGCTGGTGATCGCAGTTCTCGTCAATGAAG CTGGAGAGGTGCAGGCGGTCGTCGAGGATTTCGGAAACGAAAAGGCAACAGTGCGGATGCTGGCTGATTTTGCCGTACCG CAGGATAAGACCATACAGGTGTGGACATTGCCCTCCAGAGAGGTCGGGCCTGTTTCGCTTGGTTTGATTGAAGGCGTTCG TTCGGCCAGTCTCGAAGGACCGACGCTGCCGAAGCCGCGAAACGACCAGCTTTATGAGATCACCCTCGAGCAGGCAGGTG GATCGCCGACGGGCAGACCGACCGGGCCAATTCTGGCGAAGGGGCTGGCGCGAATGCCTCGTTGA
Upstream 100 bases:
>100_bases GATATTCCCATGGCGAAATCGCCGGCCGGTTGCGCGTTCCGCTTGGCACGACGAAATCCTGGATAAGGCGCGGGCTTTCC GCTCTTCGGGAGTGCATGGC
Downstream 100 bases:
>100_bases AAACTGGTGTGACGTCGTTATGGAGAATTGCGGCCTGGTTTAGTCGCCAATGGCAACACATCGACGTCACGCAGTCGCAT CACATCGGCAGATTGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTYDQKDIPAIADDYVLGLLEASEAAAIETATERDGELRAAIAASRERFLPLDTSVAPAAVNSELWSNIESRLPPQAKFT ANKSTRTANDNRKNGWRSIAVSAIAATLVLAAGLTFSLTRTTEPLVIAVLVNEAGEVQAVVEDFGNEKATVRMLADFAVP QDKTIQVWTLPSREVGPVSLGLIEGVRSASLEGPTLPKPRNDQLYEITLEQAGGSPTGRPTGPILAKGLARMPR
Sequences:
>Translated_234_residues MTYDQKDIPAIADDYVLGLLEASEAAAIETATERDGELRAAIAASRERFLPLDTSVAPAAVNSELWSNIESRLPPQAKFT ANKSTRTANDNRKNGWRSIAVSAIAATLVLAAGLTFSLTRTTEPLVIAVLVNEAGEVQAVVEDFGNEKATVRMLADFAVP QDKTIQVWTLPSREVGPVSLGLIEGVRSASLEGPTLPKPRNDQLYEITLEQAGGSPTGRPTGPILAKGLARMPR >Mature_233_residues TYDQKDIPAIADDYVLGLLEASEAAAIETATERDGELRAAIAASRERFLPLDTSVAPAAVNSELWSNIESRLPPQAKFTA NKSTRTANDNRKNGWRSIAVSAIAATLVLAAGLTFSLTRTTEPLVIAVLVNEAGEVQAVVEDFGNEKATVRMLADFAVPQ DKTIQVWTLPSREVGPVSLGLIEGVRSASLEGPTLPKPRNDQLYEITLEQAGGSPTGRPTGPILAKGLARMPR
Specific function: Unknown
COG id: COG5343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24976; Mature: 24844
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYDQKDIPAIADDYVLGLLEASEAAAIETATERDGELRAAIAASRERFLPLDTSVAPAA CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHH VNSELWSNIESRLPPQAKFTANKSTRTANDNRKNGWRSIAVSAIAATLVLAAGLTFSLTR HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC TTEPLVIAVLVNEAGEVQAVVEDFGNEKATVRMLADFAVPQDKTIQVWTLPSREVGPVSL CCCCEEEEEEECCCCHHHHHHHHHCCCCCEEHHHHHHCCCCCCEEEEEECCCCCCCCCHH GLIEGVRSASLEGPTLPKPRNDQLYEITLEQAGGSPTGRPTGPILAKGLARMPR HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TYDQKDIPAIADDYVLGLLEASEAAAIETATERDGELRAAIAASRERFLPLDTSVAPAA CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHH VNSELWSNIESRLPPQAKFTANKSTRTANDNRKNGWRSIAVSAIAATLVLAAGLTFSLTR HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC TTEPLVIAVLVNEAGEVQAVVEDFGNEKATVRMLADFAVPQDKTIQVWTLPSREVGPVSL CCCCEEEEEEECCCCHHHHHHHHHCCCCCEEHHHHHHCCCCCCEEEEEECCCCCCCCCHH GLIEGVRSASLEGPTLPKPRNDQLYEITLEQAGGSPTGRPTGPILAKGLARMPR HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA