Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184308
Identifier: 159184308
GI number: 159184308
Start: 442525
End: 443106
Strand: Direct
Name: 159184308
Synonym: Atu0447
Alternate gene names: NA
Gene position: 442525-443106 (Clockwise)
Preceding gene: 15887796
Following gene: 15887798
Centisome position: 15.57
GC content: 60.48
Gene sequence:
>582_bases ATGCAGATCACATGCGCCTGCTGCGGTGCTGTCGCCTATTTCCCGCATCAAACCGGGGTCAATCGCAAGCCGCCAATCGC GGCAACACAACATTTCCAGAACAAGGGATGGGTGGTCGGCGGCAATCCGCGCAAGGATTTCTGCCCGATCCACGCCGCCC CTGCCAAGCGTAAAGGACAAAAAGCCATGGTGGACACGGTAGCGACGATTGCAGACAAGCCCCGTGAAATGAGCCGCGAG GACCGGCGCATTATCAATGACAAGCTGGACGAGGTTTACGCCAAGGACGCCTATAAATCCCCCTGGACGGATTCTGCCGT GGCAAAGGATTTGGGCGTGCCGCGCGATTGGGTGGCGCAGGTCCGCGACCAGTTCTTCGGCCCGGCTGGCTCGAACCCGC TTTATGACGAGTTCTTGAAAGAGACGAAGCTGGTGGAAGGTGCGTTCCTTGCCTGCGAGGAAGCGACCGCGCGCGCCGAA AAAGCCGCTGCTGACCAGCGCCGGGCGCATGGCGATCTTTGCAAGGCGATGGACAGCTACCGCGTTCTCGCGCGCAAGGT TGAGCGGGAAATCAGCCGATGA
Upstream 100 bases:
>100_bases TTCGGAAGGACTTCGAAGCGTGGAAAAGAGGGAGTTCCCGGTGAGCGACCGCATCTTTCCAGAAGTTTCCATCCCCTACG GCGACAAGTCCACGAAGGCC
Downstream 100 bases:
>100_bases CCGACCTCATGCCCATCGTTGAAATTCTGGCGGACTGCCAGACGGACGCGGCGCGCGCGGACTGGCTTTTGCGCGCGCCG CAGGGCGTCATCTACCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MQITCACCGAVAYFPHQTGVNRKPPIAATQHFQNKGWVVGGNPRKDFCPIHAAPAKRKGQKAMVDTVATIADKPREMSRE DRRIINDKLDEVYAKDAYKSPWTDSAVAKDLGVPRDWVAQVRDQFFGPAGSNPLYDEFLKETKLVEGAFLACEEATARAE KAAADQRRAHGDLCKAMDSYRVLARKVEREISR
Sequences:
>Translated_193_residues MQITCACCGAVAYFPHQTGVNRKPPIAATQHFQNKGWVVGGNPRKDFCPIHAAPAKRKGQKAMVDTVATIADKPREMSRE DRRIINDKLDEVYAKDAYKSPWTDSAVAKDLGVPRDWVAQVRDQFFGPAGSNPLYDEFLKETKLVEGAFLACEEATARAE KAAADQRRAHGDLCKAMDSYRVLARKVEREISR >Mature_193_residues MQITCACCGAVAYFPHQTGVNRKPPIAATQHFQNKGWVVGGNPRKDFCPIHAAPAKRKGQKAMVDTVATIADKPREMSRE DRRIINDKLDEVYAKDAYKSPWTDSAVAKDLGVPRDWVAQVRDQFFGPAGSNPLYDEFLKETKLVEGAFLACEEATARAE KAAADQRRAHGDLCKAMDSYRVLARKVEREISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21510; Mature: 21510
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQITCACCGAVAYFPHQTGVNRKPPIAATQHFQNKGWVVGGNPRKDFCPIHAAPAKRKGQ CEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHCCH KAMVDTVATIADKPREMSREDRRIINDKLDEVYAKDAYKSPWTDSAVAKDLGVPRDWVAQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH VRDQFFGPAGSNPLYDEFLKETKLVEGAFLACEEATARAEKAAADQRRAHGDLCKAMDSY HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLARKVEREISR HHHHHHHHHHHCC >Mature Secondary Structure MQITCACCGAVAYFPHQTGVNRKPPIAATQHFQNKGWVVGGNPRKDFCPIHAAPAKRKGQ CEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHCCH KAMVDTVATIADKPREMSREDRRIINDKLDEVYAKDAYKSPWTDSAVAKDLGVPRDWVAQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH VRDQFFGPAGSNPLYDEFLKETKLVEGAFLACEEATARAEKAAADQRRAHGDLCKAMDSY HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLARKVEREISR HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA