Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887796
Identifier: 15887796
GI number: 15887796
Start: 441917
End: 442468
Strand: Direct
Name: 15887796
Synonym: Atu8082
Alternate gene names: NA
Gene position: 441917-442468 (Clockwise)
Preceding gene: 159184307
Following gene: 159184308
Centisome position: 15.55
GC content: 60.87
Gene sequence:
>552_bases ATGAATAAGCTTGTCGATCCTGCCCGCGCTCGCGAGCAAAAAGCCGTTGATCGCCTCCGCTACCTTTCGGCGCGCATCGA CGGCGACGTATGGGCTTTCGAGCCACGCGGGAACAATATCGCAGTCATCGCCCGCCGTTCGACGGGTGATGAGGCGCTTA TCTGCACGCTGCATGCCGACGCCCTGCCGGACGAACGCGACCTGATTTGCGGGGCGGCGGAAAATCTCGCCTTTCTCTTG GGCCTTATCGGTCGGGCGTCTGATGCCGTTCGGAACCTGAAAAAGCAGCTGGAGGCGCAGCAAACCGCCGCCGTGCGGAA AAAGTACGCGGCGCAGGCTGCAATCCTGCTTTCAGACCGCACCTTCCAGCGCTTCCTTGAAATCAAGGGCGCGGGCGGGC CGGTGCGCGACAAGGCGCAGGCCCACACGCGTTTGAAAAGCATCCTCGCCATTTCCAGCAAAAAAGAAATCGACAACGAC CCGCGCGCGCAAGCCGCCTTCCTTCATTTTCGGAAGGACTTCGAAGCGTGGAAAAGAGGGAGTTCCCGGTGA
Upstream 100 bases:
>100_bases CAACGAATGCCGCCTTGATCTGGTCAGTGGGTCGATCTGCTTCGCTGTTGGCGCACTCGGTGCCAGCATGATGTATCTGG CGATGATGGCGGGCTGAACG
Downstream 100 bases:
>100_bases GCGACCGCATCTTTCCAGAAGTTTCCATCCCCTACGGCGACAAGTCCACGAAGGCCATGCAGATCACATGCGCCTGCTGC GGTGCTGTCGCCTATTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MNKLVDPARAREQKAVDRLRYLSARIDGDVWAFEPRGNNIAVIARRSTGDEALICTLHADALPDERDLICGAAENLAFLL GLIGRASDAVRNLKKQLEAQQTAAVRKKYAAQAAILLSDRTFQRFLEIKGAGGPVRDKAQAHTRLKSILAISSKKEIDND PRAQAAFLHFRKDFEAWKRGSSR
Sequences:
>Translated_183_residues MNKLVDPARAREQKAVDRLRYLSARIDGDVWAFEPRGNNIAVIARRSTGDEALICTLHADALPDERDLICGAAENLAFLL GLIGRASDAVRNLKKQLEAQQTAAVRKKYAAQAAILLSDRTFQRFLEIKGAGGPVRDKAQAHTRLKSILAISSKKEIDND PRAQAAFLHFRKDFEAWKRGSSR >Mature_183_residues MNKLVDPARAREQKAVDRLRYLSARIDGDVWAFEPRGNNIAVIARRSTGDEALICTLHADALPDERDLICGAAENLAFLL GLIGRASDAVRNLKKQLEAQQTAAVRKKYAAQAAILLSDRTFQRFLEIKGAGGPVRDKAQAHTRLKSILAISSKKEIDND PRAQAAFLHFRKDFEAWKRGSSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20335; Mature: 20335
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLVDPARAREQKAVDRLRYLSARIDGDVWAFEPRGNNIAVIARRSTGDEALICTLHAD CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECC ALPDERDLICGAAENLAFLLGLIGRASDAVRNLKKQLEAQQTAAVRKKYAAQAAILLSDR CCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFQRFLEIKGAGGPVRDKAQAHTRLKSILAISSKKEIDNDPRAQAAFLHFRKDFEAWKRG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHCCC SSR CCC >Mature Secondary Structure MNKLVDPARAREQKAVDRLRYLSARIDGDVWAFEPRGNNIAVIARRSTGDEALICTLHAD CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECC ALPDERDLICGAAENLAFLLGLIGRASDAVRNLKKQLEAQQTAAVRKKYAAQAAILLSDR CCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFQRFLEIKGAGGPVRDKAQAHTRLKSILAISSKKEIDNDPRAQAAFLHFRKDFEAWKRG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHCCC SSR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA