Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15887796

Identifier: 15887796

GI number: 15887796

Start: 441917

End: 442468

Strand: Direct

Name: 15887796

Synonym: Atu8082

Alternate gene names: NA

Gene position: 441917-442468 (Clockwise)

Preceding gene: 159184307

Following gene: 159184308

Centisome position: 15.55

GC content: 60.87

Gene sequence:

>552_bases
ATGAATAAGCTTGTCGATCCTGCCCGCGCTCGCGAGCAAAAAGCCGTTGATCGCCTCCGCTACCTTTCGGCGCGCATCGA
CGGCGACGTATGGGCTTTCGAGCCACGCGGGAACAATATCGCAGTCATCGCCCGCCGTTCGACGGGTGATGAGGCGCTTA
TCTGCACGCTGCATGCCGACGCCCTGCCGGACGAACGCGACCTGATTTGCGGGGCGGCGGAAAATCTCGCCTTTCTCTTG
GGCCTTATCGGTCGGGCGTCTGATGCCGTTCGGAACCTGAAAAAGCAGCTGGAGGCGCAGCAAACCGCCGCCGTGCGGAA
AAAGTACGCGGCGCAGGCTGCAATCCTGCTTTCAGACCGCACCTTCCAGCGCTTCCTTGAAATCAAGGGCGCGGGCGGGC
CGGTGCGCGACAAGGCGCAGGCCCACACGCGTTTGAAAAGCATCCTCGCCATTTCCAGCAAAAAAGAAATCGACAACGAC
CCGCGCGCGCAAGCCGCCTTCCTTCATTTTCGGAAGGACTTCGAAGCGTGGAAAAGAGGGAGTTCCCGGTGA

Upstream 100 bases:

>100_bases
CAACGAATGCCGCCTTGATCTGGTCAGTGGGTCGATCTGCTTCGCTGTTGGCGCACTCGGTGCCAGCATGATGTATCTGG
CGATGATGGCGGGCTGAACG

Downstream 100 bases:

>100_bases
GCGACCGCATCTTTCCAGAAGTTTCCATCCCCTACGGCGACAAGTCCACGAAGGCCATGCAGATCACATGCGCCTGCTGC
GGTGCTGTCGCCTATTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNKLVDPARAREQKAVDRLRYLSARIDGDVWAFEPRGNNIAVIARRSTGDEALICTLHADALPDERDLICGAAENLAFLL
GLIGRASDAVRNLKKQLEAQQTAAVRKKYAAQAAILLSDRTFQRFLEIKGAGGPVRDKAQAHTRLKSILAISSKKEIDND
PRAQAAFLHFRKDFEAWKRGSSR

Sequences:

>Translated_183_residues
MNKLVDPARAREQKAVDRLRYLSARIDGDVWAFEPRGNNIAVIARRSTGDEALICTLHADALPDERDLICGAAENLAFLL
GLIGRASDAVRNLKKQLEAQQTAAVRKKYAAQAAILLSDRTFQRFLEIKGAGGPVRDKAQAHTRLKSILAISSKKEIDND
PRAQAAFLHFRKDFEAWKRGSSR
>Mature_183_residues
MNKLVDPARAREQKAVDRLRYLSARIDGDVWAFEPRGNNIAVIARRSTGDEALICTLHADALPDERDLICGAAENLAFLL
GLIGRASDAVRNLKKQLEAQQTAAVRKKYAAQAAILLSDRTFQRFLEIKGAGGPVRDKAQAHTRLKSILAISSKKEIDND
PRAQAAFLHFRKDFEAWKRGSSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20335; Mature: 20335

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLVDPARAREQKAVDRLRYLSARIDGDVWAFEPRGNNIAVIARRSTGDEALICTLHAD
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECC
ALPDERDLICGAAENLAFLLGLIGRASDAVRNLKKQLEAQQTAAVRKKYAAQAAILLSDR
CCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFQRFLEIKGAGGPVRDKAQAHTRLKSILAISSKKEIDNDPRAQAAFLHFRKDFEAWKRG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHCCC
SSR
CCC
>Mature Secondary Structure
MNKLVDPARAREQKAVDRLRYLSARIDGDVWAFEPRGNNIAVIARRSTGDEALICTLHAD
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECC
ALPDERDLICGAAENLAFLLGLIGRASDAVRNLKKQLEAQQTAAVRKKYAAQAAILLSDR
CCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFQRFLEIKGAGGPVRDKAQAHTRLKSILAISSKKEIDNDPRAQAAFLHFRKDFEAWKRG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHCCC
SSR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA