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The map label for this gene is yhbH [C]

Identifier: 159184262

GI number: 159184262

Start: 324366

End: 324938

Strand: Reverse

Name: yhbH [C]

Synonym: Atu0331

Alternate gene names: 159184262

Gene position: 324938-324366 (Counterclockwise)

Preceding gene: 15887683

Following gene: 15887681

Centisome position: 11.44

GC content: 55.85

Gene sequence:

>573_bases
ATGAGTGTGCGTGTATCTGGTAAACATATGGAGATCGGTGAATCTTTCCGTCAGCGGATTGAGGACAATATAGGTCTGGC
AGTTACCAAATACTTCGATGGGGGGTATTCAGGCCAGGTAACCGTGGAGAAGTCCGGATCGCGTTTTGCGGCCGATTGCA
AGCTGCATCTCGATACCGGCGTCGTATTGCATGCGGCGGGTCAGGCGAACGATCCGCAAGCCAGCTTCGATGCTGCCGCT
GAGCGGATCGAGAAGCGCCTGCGTCGTTACAAGCGCAAACTGAAGGACCATCACAGTGGTTCGAACGGCGCGCTCCCGGA
AATCGCCTATACGGTGATGGATGCTGTTCCCGATGAGGACCACGAGGTCCCCGAGGATTATGCACCCACCATTGTGGCGG
AGAGCTCGAAACAGATTAAGACAATGTCAGTCGCCAGCGCCGTGATGGCGCTCGACATGACCGACGAGCCGGTTCTGCTG
TTCCGCAGCCCGGGCAAGGAATATCTCAACATCGTTTACCGACGTCATGACGGCAATATTGGCTGGATCGACGCGGAAAC
GATCAAGAGCTGA

Upstream 100 bases:

>100_bases
AATTCGAATGAAGGCTTTTTAAGGCCTTCGAAACGCTTGGATGCGCGCGCGGCTTGACGTAAGCTGGTACTCGCAAATCA
CTACAAAAAGGAAAATTTCC

Downstream 100 bases:

>100_bases
ACAGTCTGACAAGACGTGGGAGGCAGAGCGCCAAGGCGCATCTGCCTCCTGCATCGTCTCGATGGCATGAAGGAAAAAGA
GAATGGCGTTGGCAGATTTG

Product: sigma-54 modulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSVRVSGKHMEIGESFRQRIEDNIGLAVTKYFDGGYSGQVTVEKSGSRFAADCKLHLDTGVVLHAAGQANDPQASFDAAA
ERIEKRLRRYKRKLKDHHSGSNGALPEIAYTVMDAVPDEDHEVPEDYAPTIVAESSKQIKTMSVASAVMALDMTDEPVLL
FRSPGKEYLNIVYRRHDGNIGWIDAETIKS

Sequences:

>Translated_190_residues
MSVRVSGKHMEIGESFRQRIEDNIGLAVTKYFDGGYSGQVTVEKSGSRFAADCKLHLDTGVVLHAAGQANDPQASFDAAA
ERIEKRLRRYKRKLKDHHSGSNGALPEIAYTVMDAVPDEDHEVPEDYAPTIVAESSKQIKTMSVASAVMALDMTDEPVLL
FRSPGKEYLNIVYRRHDGNIGWIDAETIKS
>Mature_189_residues
SVRVSGKHMEIGESFRQRIEDNIGLAVTKYFDGGYSGQVTVEKSGSRFAADCKLHLDTGVVLHAAGQANDPQASFDAAAE
RIEKRLRRYKRKLKDHHSGSNGALPEIAYTVMDAVPDEDHEVPEDYAPTIVAESSKQIKTMSVASAVMALDMTDEPVLLF
RSPGKEYLNIVYRRHDGNIGWIDAETIKS

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21011; Mature: 20880

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRVSGKHMEIGESFRQRIEDNIGLAVTKYFDGGYSGQVTVEKSGSRFAADCKLHLDTG
CCEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEEEEECCC
VVLHAAGQANDPQASFDAAAERIEKRLRRYKRKLKDHHSGSNGALPEIAYTVMDAVPDED
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
HEVPEDYAPTIVAESSKQIKTMSVASAVMALDMTDEPVLLFRSPGKEYLNIVYRRHDGNI
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHEEEEEEEECCCE
GWIDAETIKS
EEEEHHHHCC
>Mature Secondary Structure 
SVRVSGKHMEIGESFRQRIEDNIGLAVTKYFDGGYSGQVTVEKSGSRFAADCKLHLDTG
CEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEEEEECCC
VVLHAAGQANDPQASFDAAAERIEKRLRRYKRKLKDHHSGSNGALPEIAYTVMDAVPDED
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
HEVPEDYAPTIVAESSKQIKTMSVASAVMALDMTDEPVLLFRSPGKEYLNIVYRRHDGNI
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHEEEEEEEECCCE
GWIDAETIKS
EEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 3034856 [H]