Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is proB
Identifier: 15890029
GI number: 15890029
Start: 2784811
End: 2785980
Strand: Reverse
Name: proB
Synonym: Atu2780
Alternate gene names: 15890029
Gene position: 2785980-2784811 (Counterclockwise)
Preceding gene: 159185379
Following gene: 159185378
Centisome position: 98.04
GC content: 60.94
Gene sequence:
>1170_bases ATGAGCCTGACGCGCAAGCCGCTGGCGAGCCACCACCGGATCGTCATCAAGATCGGTTCGGCGCTTCTGGTGGACCGGAA AAGCGGCCTGAAGAAAGACTGGCTGGATGCCATCTGCGAGGATATCGCGGCGCTGAAAAAAAACGGCGCGGATGTCCAGG TCGTGTCTTCTGGCGCCATTGCGCTTGGCCGCACCGTGCTCGGCCTGCCTTCCGGTGCACTGAAGCTGGAAGAAAGCCAG GCGGCGGCGGCAGTCGGCCAGATTGCGCTGGCGCGGGCATGGTCGGAAAGCCTGTCGCGGCATGAGATCGTCGCCGGTCA AATTCTATTGACGCTATCCGATACCGAGGAGCGTCGGCGTTATCTCAACGCGCGTGCCACCATCAATCAGCTTTTGAAGA TCGGCGCCATTCCGATCATCAATGAAAACGACACGGTGGCGACCACTGAAATCCGTTATGGGGACAATGACCGTCTGGCC GCGCGCGTGGCCACGATGACGGGTGCCGATCTCCTGGTGCTGTTGTCGGATATTGACGGGCTCTACACCGCCCCACCGCA TCTCGATCCCGATGCGAAATTTCTTGAGACGATTGCCGATATCACGCCCGAAATCGAAGCCATGGCGGGTGGGGCGGCCT CCGAGCTTTCGCGCGGCGGTATGCGCACCAAGATCGATGCGGGCAAGATCGCGACCGCTGCCGGTTGTGGTATGATCATC GCTTCCGGCAAGACGCTCAATCCGCTGAAGGCAATCGAAAACGGCGCACGGTCTTCATGGTTTGCACCCTCCGGCACGCC GGTGACGGCCCGCAAGACCTGGATTGCCGGGCAATTGCAGCCGGCCGGCGAAATCCATGTGGATGCCGGGGCCGAAAAGG CGCTTTATGCTGGGAAAAGCCTGCTTCCCGCCGGTGTGCGGCAGGTGAAGGGCAATTTCGGACGCGGCGATGCCATTGCC ATCATCGGCGTCGAAGGCCGTGAAGTGGCGCGCGGTCTTGCGGGTTACGATGCAGAGGAAGCGCGCCTGATCATCGGCCA CAAGTCCAACGAGATCGAGACGATCCTCGGTTATGTCGGACGGGCGGCGATGATCCATCGCGACGACCTTGTGATGACTG GCGCTGCCGTCAAAGTGAAACATGCAAAGAAGGATGAGGTCCATGCCTGA
Upstream 100 bases:
>100_bases TTCGCGACATCATCGTTTCGGCAAGCAATGGCGGCGACACCGCCCTTCCAGACCGGTCGATGCCGCATGAGAGCGAGGTC GAGGAAGAGGACGACCGCCT
Downstream 100 bases:
>100_bases ACAGGCCGTGAAGCAGAGCCATGATATCGATGCGCTGATGATGACCATCGGCGCTCAGGCGAAAGCTGCTTCGCGACCGT TGTCCATCGCCGGCACGGAC
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSLTRKPLASHHRIVIKIGSALLVDRKSGLKKDWLDAICEDIAALKKNGADVQVVSSGAIALGRTVLGLPSGALKLEESQ AAAAVGQIALARAWSESLSRHEIVAGQILLTLSDTEERRRYLNARATINQLLKIGAIPIINENDTVATTEIRYGDNDRLA ARVATMTGADLLVLLSDIDGLYTAPPHLDPDAKFLETIADITPEIEAMAGGAASELSRGGMRTKIDAGKIATAAGCGMII ASGKTLNPLKAIENGARSSWFAPSGTPVTARKTWIAGQLQPAGEIHVDAGAEKALYAGKSLLPAGVRQVKGNFGRGDAIA IIGVEGREVARGLAGYDAEEARLIIGHKSNEIETILGYVGRAAMIHRDDLVMTGAAVKVKHAKKDEVHA
Sequences:
>Translated_389_residues MSLTRKPLASHHRIVIKIGSALLVDRKSGLKKDWLDAICEDIAALKKNGADVQVVSSGAIALGRTVLGLPSGALKLEESQ AAAAVGQIALARAWSESLSRHEIVAGQILLTLSDTEERRRYLNARATINQLLKIGAIPIINENDTVATTEIRYGDNDRLA ARVATMTGADLLVLLSDIDGLYTAPPHLDPDAKFLETIADITPEIEAMAGGAASELSRGGMRTKIDAGKIATAAGCGMII ASGKTLNPLKAIENGARSSWFAPSGTPVTARKTWIAGQLQPAGEIHVDAGAEKALYAGKSLLPAGVRQVKGNFGRGDAIA IIGVEGREVARGLAGYDAEEARLIIGHKSNEIETILGYVGRAAMIHRDDLVMTGAAVKVKHAKKDEVHA >Mature_388_residues SLTRKPLASHHRIVIKIGSALLVDRKSGLKKDWLDAICEDIAALKKNGADVQVVSSGAIALGRTVLGLPSGALKLEESQA AAAVGQIALARAWSESLSRHEIVAGQILLTLSDTEERRRYLNARATINQLLKIGAIPIINENDTVATTEIRYGDNDRLAA RVATMTGADLLVLLSDIDGLYTAPPHLDPDAKFLETIADITPEIEAMAGGAASELSRGGMRTKIDAGKIATAAGCGMIIA SGKTLNPLKAIENGARSSWFAPSGTPVTARKTWIAGQLQPAGEIHVDAGAEKALYAGKSLLPAGVRQVKGNFGRGDAIAI IGVEGREVARGLAGYDAEEARLIIGHKSNEIETILGYVGRAAMIHRDDLVMTGAAVKVKHAKKDEVHA
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain
Homologues:
Organism=Homo sapiens, GI62912457, Length=268, Percent_Identity=32.089552238806, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI21361368, Length=270, Percent_Identity=31.8518518518519, Blast_Score=122, Evalue=8e-28, Organism=Escherichia coli, GI1786437, Length=366, Percent_Identity=41.5300546448087, Blast_Score=263, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17569967, Length=258, Percent_Identity=33.7209302325581, Blast_Score=127, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17569969, Length=258, Percent_Identity=33.7209302325581, Blast_Score=127, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6321822, Length=415, Percent_Identity=32.289156626506, Blast_Score=183, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6320506, Length=416, Percent_Identity=33.6538461538462, Blast_Score=181, Evalue=1e-46, Organism=Drosophila melanogaster, GI21357643, Length=295, Percent_Identity=30.5084745762712, Blast_Score=111, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROB_AGRT5 (Q8UBS0)
Other databases:
- EMBL: AE007869 - PIR: AC2918 - PIR: F97692 - RefSeq: NP_355710.1 - ProteinModelPortal: Q8UBS0 - SMR: Q8UBS0 - STRING: Q8UBS0 - GeneID: 1134818 - GenomeReviews: AE007869_GR - KEGG: atu:Atu2780 - eggNOG: COG0263 - HOGENOM: HBG507643 - OMA: TFGDNDM - PhylomeDB: Q8UBS0 - ProtClustDB: PRK05429 - BioCyc: ATUM176299-1:ATU2780-MONOMER - GO: GO:0005737 - HAMAP: MF_00456 - InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000729 - PRINTS: PR00474 - SMART: SM00359 - TIGRFAMs: TIGR01027
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA; SSF53633 Aa_kinase; SSF88697 PUA-like
EC number: =2.7.2.11
Molecular weight: Translated: 40956; Mature: 40824
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS00902 GLUTAMATE_5_KINASE; PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTRKPLASHHRIVIKIGSALLVDRKSGLKKDWLDAICEDIAALKKNGADVQVVSSGAI CCCCCCCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCH ALGRTVLGLPSGALKLEESQAAAAVGQIALARAWSESLSRHEIVAGQILLTLSDTEERRR HHCHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCHHHHH YLNARATINQLLKIGAIPIINENDTVATTEIRYGDNDRLAARVATMTGADLLVLLSDIDG HHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCCCCCEEEEEHHCCCHHEEEEECCCC LYTAPPHLDPDAKFLETIADITPEIEAMAGGAASELSRGGMRTKIDAGKIATAAGCGMII CCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHCCCCEEEECCCCEEHHCCCCEEE ASGKTLNPLKAIENGARSSWFAPSGTPVTARKTWIAGQLQPAGEIHVDAGAEKALYAGKS ECCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCHHHHCCCC LLPAGVRQVKGNFGRGDAIAIIGVEGREVARGLAGYDAEEARLIIGHKSNEIETILGYVG CCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHC RAAMIHRDDLVMTGAAVKVKHAKKDEVHA CHHEEECCCEEEECCEEEEECCCCCCCCC >Mature Secondary Structure SLTRKPLASHHRIVIKIGSALLVDRKSGLKKDWLDAICEDIAALKKNGADVQVVSSGAI CCCCCCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCH ALGRTVLGLPSGALKLEESQAAAAVGQIALARAWSESLSRHEIVAGQILLTLSDTEERRR HHCHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCHHHHH YLNARATINQLLKIGAIPIINENDTVATTEIRYGDNDRLAARVATMTGADLLVLLSDIDG HHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCCCCCEEEEEHHCCCHHEEEEECCCC LYTAPPHLDPDAKFLETIADITPEIEAMAGGAASELSRGGMRTKIDAGKIATAAGCGMII CCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHCCCCEEEECCCCEEHHCCCCEEE ASGKTLNPLKAIENGARSSWFAPSGTPVTARKTWIAGQLQPAGEIHVDAGAEKALYAGKS ECCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCHHHHCCCC LLPAGVRQVKGNFGRGDAIAIIGVEGREVARGLAGYDAEEARLIIGHKSNEIETILGYVG CCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHC RAAMIHRDDLVMTGAAVKVKHAKKDEVHA CHHEEECCCEEEECCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194