Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is glmS [H]
Identifier: 15889863
GI number: 15889863
Start: 2585684
End: 2586706
Strand: Direct
Name: glmS [H]
Synonym: Atu2607
Alternate gene names: 15889863
Gene position: 2585684-2586706 (Clockwise)
Preceding gene: 15889862
Following gene: 15889864
Centisome position: 90.99
GC content: 61.68
Gene sequence:
>1023_bases ATGACAACCCTGATGCGCCAGGAAATCGATGAGATTCCCGATGCTGTCGCCCGCCTGCTGGACAATGCCAAGACCGACTT CCTGGAGGCAGGCAGCAAGTTGAAGGCCCGTGACCCGGCAGTCGTCGTTACCATTGCCCGCGGCTCCTCCGATCATGCCG CACATTTCCTGAAATATGCCATCGAATTGCAGACCGGTCTGCCGGTCGCCTCGCTCGGGCCTTCCCTCGCCTCCATCTAT CAGACGAAACTGCGGCTGGAACGGGCAGCAGCCTTCGCCGTTTCGCAATCCGGCAAGAGCCCTGACATCGTTGCCCTCGC ACAAAGCGCCCGCAAGGGCGGCGCGCTCACCTTCTCGCTCGTCAACACCCTGCCATCCCCACTGGGTGAGGCGGCCGACC ACGCCATCAATATCCAGGCGGGGCCGGAAAAGGCGGTTGCAGCGACCAAATCCTTCGTCAATTCCATCGTTGCCGGTCTG GCTATCCTTGCCGAATGGACGGAAGACAGCCTGCTTGCCAGGGCCGTCAGCGCCCTGCCGCAGAATTTCGCCAAGGCCAT CGCGCTCGATTGGAGCCACATCGGCGAGGCGGTGAAGGGCGAAGAATCGCTTTACATGCTGGGCCGCGGTCCGGCGCTCG CCATTGCCGCAGAAGCTGCGCTGAAATGCAAGGAAACCTGCGAGCTGCATGCCGAAGCCTATTCCTCGGCCGAGGTCATG CATGGCCCGGTCTCGCTGGTGGCGCCGCAATTCCCCGTCATCGCCTTTGCCGCCCGCGACCGTGCCGAGACGTCGGTCAC GGATATCGCCGCAAGCCTTGCCAATAAAGGTGCGAATGTTTTCGTCACCTCCACAAAGGGCAGCCCGGCCAAGCCCCTGC CCTTCGTGGAGACCAACCACCCGCTGACCGATGCATTGCTGCTGATTGCGCCGTTTTACGGCTTTATCGAACAATTATCC CGCGCACGCGGCTTCAACCCGGATGCACCCGTGGCATTGAAGAAGGTAACGGAAACCCAATGA
Upstream 100 bases:
>100_bases CATGGAAATATCCCTCGCGCTTTACCGCAGTGATGCCTACGACCTTGTCGCCGAACTGACGATGGGTCCAGAGTAAAACA TTGATCAAGGACATGAAACG
Downstream 100 bases:
>100_bases GCGGCATCAAGGCATTTGTTGGCGCCCGCATTTTCGACGGCGCCGCATGGCACGAGGGCAGAGTGCTCGTGGTCGGTGAC GGGCATGTCACCGCCATCTC
Product: glucosamine--fructose-6-phosphate aminotransferase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTTLMRQEIDEIPDAVARLLDNAKTDFLEAGSKLKARDPAVVVTIARGSSDHAAHFLKYAIELQTGLPVASLGPSLASIY QTKLRLERAAAFAVSQSGKSPDIVALAQSARKGGALTFSLVNTLPSPLGEAADHAINIQAGPEKAVAATKSFVNSIVAGL AILAEWTEDSLLARAVSALPQNFAKAIALDWSHIGEAVKGEESLYMLGRGPALAIAAEAALKCKETCELHAEAYSSAEVM HGPVSLVAPQFPVIAFAARDRAETSVTDIAASLANKGANVFVTSTKGSPAKPLPFVETNHPLTDALLLIAPFYGFIEQLS RARGFNPDAPVALKKVTETQ
Sequences:
>Translated_340_residues MTTLMRQEIDEIPDAVARLLDNAKTDFLEAGSKLKARDPAVVVTIARGSSDHAAHFLKYAIELQTGLPVASLGPSLASIY QTKLRLERAAAFAVSQSGKSPDIVALAQSARKGGALTFSLVNTLPSPLGEAADHAINIQAGPEKAVAATKSFVNSIVAGL AILAEWTEDSLLARAVSALPQNFAKAIALDWSHIGEAVKGEESLYMLGRGPALAIAAEAALKCKETCELHAEAYSSAEVM HGPVSLVAPQFPVIAFAARDRAETSVTDIAASLANKGANVFVTSTKGSPAKPLPFVETNHPLTDALLLIAPFYGFIEQLS RARGFNPDAPVALKKVTETQ >Mature_339_residues TTLMRQEIDEIPDAVARLLDNAKTDFLEAGSKLKARDPAVVVTIARGSSDHAAHFLKYAIELQTGLPVASLGPSLASIYQ TKLRLERAAAFAVSQSGKSPDIVALAQSARKGGALTFSLVNTLPSPLGEAADHAINIQAGPEKAVAATKSFVNSIVAGLA ILAEWTEDSLLARAVSALPQNFAKAIALDWSHIGEAVKGEESLYMLGRGPALAIAAEAALKCKETCELHAEAYSSAEVMH GPVSLVAPQFPVIAFAARDRAETSVTDIAASLANKGANVFVTSTKGSPAKPLPFVETNHPLTDALLLIAPFYGFIEQLSR ARGFNPDAPVALKKVTETQ
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG2222
COG function: function code M; Predicted phosphosugar isomerases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI4826742, Length=359, Percent_Identity=25.9052924791086, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI205277386, Length=360, Percent_Identity=24.4444444444444, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1790167, Length=298, Percent_Identity=25.8389261744966, Blast_Score=86, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17539970, Length=303, Percent_Identity=29.042904290429, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17532899, Length=361, Percent_Identity=27.1468144044321, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17532897, Length=361, Percent_Identity=27.1468144044321, Blast_Score=105, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6322745, Length=365, Percent_Identity=26.027397260274, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6323731, Length=206, Percent_Identity=25.2427184466019, Blast_Score=80, Evalue=7e-16, Organism=Drosophila melanogaster, GI21357745, Length=359, Percent_Identity=25.3481894150418, Blast_Score=97, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 35717; Mature: 35586
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLMRQEIDEIPDAVARLLDNAKTDFLEAGSKLKARDPAVVVTIARGSSDHAAHFLKYA CCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH IELQTGLPVASLGPSLASIYQTKLRLERAAAFAVSQSGKSPDIVALAQSARKGGALTFSL HHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEHHH VNTLPSPLGEAADHAINIQAGPEKAVAATKSFVNSIVAGLAILAEWTEDSLLARAVSALP HHHCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH QNFAKAIALDWSHIGEAVKGEESLYMLGRGPALAIAAEAALKCKETCELHAEAYSSAEVM HHHHHHHHHCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH HGPVSLVAPQFPVIAFAARDRAETSVTDIAASLANKGANVFVTSTKGSPAKPLPFVETNH CCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC PLTDALLLIAPFYGFIEQLSRARGFNPDAPVALKKVTETQ CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC >Mature Secondary Structure TTLMRQEIDEIPDAVARLLDNAKTDFLEAGSKLKARDPAVVVTIARGSSDHAAHFLKYA CCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH IELQTGLPVASLGPSLASIYQTKLRLERAAAFAVSQSGKSPDIVALAQSARKGGALTFSL HHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEHHH VNTLPSPLGEAADHAINIQAGPEKAVAATKSFVNSIVAGLAILAEWTEDSLLARAVSALP HHHCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH QNFAKAIALDWSHIGEAVKGEESLYMLGRGPALAIAAEAALKCKETCELHAEAYSSAEVM HHHHHHHHHCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH HGPVSLVAPQFPVIAFAARDRAETSVTDIAASLANKGANVFVTSTKGSPAKPLPFVETNH CCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC PLTDALLLIAPFYGFIEQLSRARGFNPDAPVALKKVTETQ CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA