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The map label for this gene is acvB

Identifier: 15889787

GI number: 15889787

Start: 2492645

End: 2494015

Strand: Direct

Name: acvB

Synonym: Atu2522

Alternate gene names: NA

Gene position: 2492645-2494015 (Clockwise)

Preceding gene: 15889786

Following gene: 15889788

Centisome position: 87.72

GC content: 59.74

Gene sequence:

>1371_bases
ATGATGAAACGCAATCTGATAGGGGCATTCATTGCCGCTTCGACGCTACTCTCCTCGTCTGTCGCCTTTTCCCAGGATAA
GCCGGCCTATGAAACCGGTATGATCCCGGCCGACCACATCATGGTGCCCGATGGCGATATCCAGGCCAGCATCTTCCTGA
TTTCCGACGCCAATGGCTGGACGGAGGCCGACGAGACCCGCGCCAAGGCGCTTGTCGAAAAAGGCGCCGCCGTCGTCGGC
ATCGACTTCAAGGAATATCTGAAGGCACTCGAAGCCGATGACGACGAGTGCATCTACATGATCTCGGACATCGAGTCGCT
GTCGCAGCAGATCCAGCGCACCGCCGGCACCGGCAGCTACCGCCTGCCGATCGTGACCGGCATCGGCAAGGGCGGCACGC
TTGCCCTCGCCATGATCGCACAAAGCCCCGTTTCCACCGTCCGCGAGGCGGTGGCGGTGGATCCGAAGGCGGGGCTGCCC
CTGGAAAAGATTCTCTGCACTCCGGCAACCAAGGACAAGGTGGACGGTGAAACCGTCTATGGCCTGACAGACGGTGCTCT
GCCGGCACCGGTCAGCGTCATCTTTACCCCCGACGCCGACCAGAAGGGCCGCGATCACGTCAACGCCCTGGTAAAACTGC
ATTCCGACATCGAGGTGACCGACGTTACCGACAAGGCGGACGAGGTGCTGACCCAGACCCTTTCCGACAAGGTCGACGCG
GCTGGAGACAGCGGCAACCCGCTCGGGCTTCCGATCACGGTTCTGGAGGCAAAACCTGTGATGGACACCATGGCGGTGAT
CTATTCCGGCGATGGCGGCTGGCGCGACCTGGACGAGGAAGTCGGCAGCGCCCTTCAGAAGCAGGGTGTGCCGGTCATTG
GCGTCGATGCCCTGCGGTATTTCTGGAAGGAAAAGGATCCGAAAGAGGTGGCGGGCGATCTCGCCCGCATCATCGACACC
TATCGCAAGGAATGGAAGGTCAAGAATGTCGTTCTGATCGGTTATTCCTTCGGTGCCGATATCATTCCCGCCACCTACAA
TCTCCTGCCCGACCGGGTGAAATCCTCCGTTGCGCAGCTTTCGCTGCTCGGCCTTTCCAATGAAGTGGATTTTGAAATCT
CAGTTCAGGGATGGCTTGGCGTGGCTGGTGAAGGCAAGGGCGGCAAGACCGTCGATGACATCGCCAAGATCGACCCCAAG
CTGGTGCAATGCGTTTATGGCACCGAGGAGGAAGATGAAGATCCCTGCCCCGGCCTCAAGGCAAAGGGTGTCGAAACCAT
CGGCATCGAAGGCGGGCACCATTTCGACGAGGATTACGAAGCGCTTGCCAAACGCATCGTCACCTCGCTGAAAACCAGGC
TGGCGAAATAA

Upstream 100 bases:

>100_bases
AACCCCGTTACCTTGCTGTGCAGAACGGCGCTGACGCCGCTCTGGCACTGATGGATGCGACGGTTCTGATCAGCGGCGGT
GTCAGAGGAGTGATCGGAAA

Downstream 100 bases:

>100_bases
ACCGCCACAACCGGCGCCGCGGGCAGCATATTACTGCCTGTACCTGTAGTTCCCGCTGGCAGTGAAGCTTGCGGAATCGA
TCAAACTATTATTCAAAAGA

Product: chromosomal virulence protein B

Products: NA

Alternate protein names: Virulence Protein; Acid lerance Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Type IV Secretion System VirJ-Like Protein; Acid Virulence Protein B; AcvB-Related Protein; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MMKRNLIGAFIAASTLLSSSVAFSQDKPAYETGMIPADHIMVPDGDIQASIFLISDANGWTEADETRAKALVEKGAAVVG
IDFKEYLKALEADDDECIYMISDIESLSQQIQRTAGTGSYRLPIVTGIGKGGTLALAMIAQSPVSTVREAVAVDPKAGLP
LEKILCTPATKDKVDGETVYGLTDGALPAPVSVIFTPDADQKGRDHVNALVKLHSDIEVTDVTDKADEVLTQTLSDKVDA
AGDSGNPLGLPITVLEAKPVMDTMAVIYSGDGGWRDLDEEVGSALQKQGVPVIGVDALRYFWKEKDPKEVAGDLARIIDT
YRKEWKVKNVVLIGYSFGADIIPATYNLLPDRVKSSVAQLSLLGLSNEVDFEISVQGWLGVAGEGKGGKTVDDIAKIDPK
LVQCVYGTEEEDEDPCPGLKAKGVETIGIEGGHHFDEDYEALAKRIVTSLKTRLAK

Sequences:

>Translated_456_residues
MMKRNLIGAFIAASTLLSSSVAFSQDKPAYETGMIPADHIMVPDGDIQASIFLISDANGWTEADETRAKALVEKGAAVVG
IDFKEYLKALEADDDECIYMISDIESLSQQIQRTAGTGSYRLPIVTGIGKGGTLALAMIAQSPVSTVREAVAVDPKAGLP
LEKILCTPATKDKVDGETVYGLTDGALPAPVSVIFTPDADQKGRDHVNALVKLHSDIEVTDVTDKADEVLTQTLSDKVDA
AGDSGNPLGLPITVLEAKPVMDTMAVIYSGDGGWRDLDEEVGSALQKQGVPVIGVDALRYFWKEKDPKEVAGDLARIIDT
YRKEWKVKNVVLIGYSFGADIIPATYNLLPDRVKSSVAQLSLLGLSNEVDFEISVQGWLGVAGEGKGGKTVDDIAKIDPK
LVQCVYGTEEEDEDPCPGLKAKGVETIGIEGGHHFDEDYEALAKRIVTSLKTRLAK
>Mature_456_residues
MMKRNLIGAFIAASTLLSSSVAFSQDKPAYETGMIPADHIMVPDGDIQASIFLISDANGWTEADETRAKALVEKGAAVVG
IDFKEYLKALEADDDECIYMISDIESLSQQIQRTAGTGSYRLPIVTGIGKGGTLALAMIAQSPVSTVREAVAVDPKAGLP
LEKILCTPATKDKVDGETVYGLTDGALPAPVSVIFTPDADQKGRDHVNALVKLHSDIEVTDVTDKADEVLTQTLSDKVDA
AGDSGNPLGLPITVLEAKPVMDTMAVIYSGDGGWRDLDEEVGSALQKQGVPVIGVDALRYFWKEKDPKEVAGDLARIIDT
YRKEWKVKNVVLIGYSFGADIIPATYNLLPDRVKSSVAQLSLLGLSNEVDFEISVQGWLGVAGEGKGGKTVDDIAKIDPK
LVQCVYGTEEEDEDPCPGLKAKGVETIGIEGGHHFDEDYEALAKRIVTSLKTRLAK

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48767; Mature: 48767

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRNLIGAFIAASTLLSSSVAFSQDKPAYETGMIPADHIMVPDGDIQASIFLISDANGW
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEECCCCCCEEEEEEEECCCCC
TEADETRAKALVEKGAAVVGIDFKEYLKALEADDDECIYMISDIESLSQQIQRTAGTGSY
CCHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCE
RLPIVTGIGKGGTLALAMIAQSPVSTVREAVAVDPKAGLPLEKILCTPATKDKVDGETVY
EEEEEEECCCCCCEEEHHHHHCHHHHHHHHHCCCCCCCCCHHHHEECCCCCCCCCCCEEE
GLTDGALPAPVSVIFTPDADQKGRDHVNALVKLHSDIEVTDVTDKADEVLTQTLSDKVDA
EECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHC
AGDSGNPLGLPITVLEAKPVMDTMAVIYSGDGGWRDLDEEVGSALQKQGVPVIGVDALRY
CCCCCCCCCCEEEEEECCCHHHEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHH
FWKEKDPKEVAGDLARIIDTYRKEWKVKNVVLIGYSFGADIIPATYNLLPDRVKSSVAQL
HHCCCCHHHHHHHHHHHHHHHHHHHEECEEEEEEEECCCCCCCHHHHHCHHHHHHHHHHH
SLLGLSNEVDFEISVQGWLGVAGEGKGGKTVDDIAKIDPKLVQCVYGTEEEDEDPCPGLK
HHCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC
AKGVETIGIEGGHHFDEDYEALAKRIVTSLKTRLAK
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKRNLIGAFIAASTLLSSSVAFSQDKPAYETGMIPADHIMVPDGDIQASIFLISDANGW
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEECCCCCCEEEEEEEECCCCC
TEADETRAKALVEKGAAVVGIDFKEYLKALEADDDECIYMISDIESLSQQIQRTAGTGSY
CCHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCE
RLPIVTGIGKGGTLALAMIAQSPVSTVREAVAVDPKAGLPLEKILCTPATKDKVDGETVY
EEEEEEECCCCCCEEEHHHHHCHHHHHHHHHCCCCCCCCCHHHHEECCCCCCCCCCCEEE
GLTDGALPAPVSVIFTPDADQKGRDHVNALVKLHSDIEVTDVTDKADEVLTQTLSDKVDA
EECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHC
AGDSGNPLGLPITVLEAKPVMDTMAVIYSGDGGWRDLDEEVGSALQKQGVPVIGVDALRY
CCCCCCCCCCEEEEEECCCHHHEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHH
FWKEKDPKEVAGDLARIIDTYRKEWKVKNVVLIGYSFGADIIPATYNLLPDRVKSSVAQL
HHCCCCHHHHHHHHHHHHHHHHHHHEECEEEEEEEECCCCCCCHHHHHCHHHHHHHHHHH
SLLGLSNEVDFEISVQGWLGVAGEGKGGKTVDDIAKIDPKLVQCVYGTEEEDEDPCPGLK
HHCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC
AKGVETIGIEGGHHFDEDYEALAKRIVTSLKTRLAK
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA