Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889643
Identifier: 15889643
GI number: 15889643
Start: 2343365
End: 2344450
Strand: Reverse
Name: 15889643
Synonym: Atu2370
Alternate gene names: NA
Gene position: 2344450-2343365 (Counterclockwise)
Preceding gene: 159185177
Following gene: 15889640
Centisome position: 82.51
GC content: 59.85
Gene sequence:
>1086_bases ATGACTATGAATGCTGAAATGCCGCTTCCTCCCGTACAAAAGGCGCTGCAAATCAACCTCCATCCTTTCGATGCTCCGCA TGCGGCCCTTACCCTGCCGCATCAGCTGCGGGTCTGGGGCGGGCAGGTGGACCGTATTCTCCTGACGGTCGATACGGGGC AGGTGGGGGCCGGCCGGTACAAGGGCAACGGTTTCGATTCAGCGCGCCAGCGTCTTTTCGACATGCTGGATGAAATGCAG ATCAACTATCCGCATCTCTATGTGGATATCGTCGATTACAGCGATGCGGCGCGCAGCGCGGTGACGCAGACTTTCTTTTC ACGCTCGCCGATTCCCTATCCCGCCAAGGCTTTCGACGGCGGGCCGTTCCATGTCTATTTTTACGGGCTGAAACGCGCCA ATGCCCGATATGTGCTGCATATGGACAGCGACATGATGTTCGGCGGCGGCAGCCCGAGCTGGTTCAGCGAGGCGGTTGCG CTGCAGAAGGCCAATCCGGATGCGCTGTGCATCACGCCCTTTTCCGGTCCGCCGACAGTGCGCGGCGATCTCGATATTTC CCGTCATGTCGGCATGCCCGGGGTGAAGAATATCCCTGCGCCGCGCAAGCTGCCGTCGCGCATCCCCACCTGGCGTTTCG CCACCGTTTCCACGCGGCTTTTCATGATCGACATGGAGCGTTTCGCCAAGCGGATCGGCTCGCTGGAATTGCTGCGGCCG GATGTCAAGCGGCGCATCCGCTCTCTTGCCTATAACCAGCAGCCGGTCTCCATGCCCGCCGAGGAAGTGCTGAGCACTAA CATGATGCGCAGCGGCGTCCACCGGCTCGATTTTCTCGGCACGGGCACGGGCATGTATTCGCTGCATCCGCCCTATCGTT CACCGGAATTCTACGCGGCGCTCGCTTCGATCGTCGAGCGTATCGAAAAGGGCAATATTCCCGAAGGTCAGCTCGGCGAT TTCGATATCAACGGATCGATGGTGGACTGGGGAAGCGCGCTCGCGGCCAAGACGCGTTCCAAACGCTATGCGAAAGCATT GCGCCATCTCATCGCTGCCAATGTCGGGCGTTTTACCAAGGCTTGA
Upstream 100 bases:
>100_bases CACGCCGGGACGGCACCGCCAACCGGCCGCTGCCGCTCGACTGGAGTTTCAACGAAAAACCCATGATGGCCGTCATCAAT GAATTCCGGAACCGTGGTGC
Downstream 100 bases:
>100_bases GGACGTCGCGCCTGTTCCGGTGCGGCGTCGGGCAGTGACCTTAATAGTCGGTGATGAGCTTGCTCCAGCTTTCCGAGCAC AACCCGCCAATATAGATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTMNAEMPLPPVQKALQINLHPFDAPHAALTLPHQLRVWGGQVDRILLTVDTGQVGAGRYKGNGFDSARQRLFDMLDEMQ INYPHLYVDIVDYSDAARSAVTQTFFSRSPIPYPAKAFDGGPFHVYFYGLKRANARYVLHMDSDMMFGGGSPSWFSEAVA LQKANPDALCITPFSGPPTVRGDLDISRHVGMPGVKNIPAPRKLPSRIPTWRFATVSTRLFMIDMERFAKRIGSLELLRP DVKRRIRSLAYNQQPVSMPAEEVLSTNMMRSGVHRLDFLGTGTGMYSLHPPYRSPEFYAALASIVERIEKGNIPEGQLGD FDINGSMVDWGSALAAKTRSKRYAKALRHLIAANVGRFTKA
Sequences:
>Translated_361_residues MTMNAEMPLPPVQKALQINLHPFDAPHAALTLPHQLRVWGGQVDRILLTVDTGQVGAGRYKGNGFDSARQRLFDMLDEMQ INYPHLYVDIVDYSDAARSAVTQTFFSRSPIPYPAKAFDGGPFHVYFYGLKRANARYVLHMDSDMMFGGGSPSWFSEAVA LQKANPDALCITPFSGPPTVRGDLDISRHVGMPGVKNIPAPRKLPSRIPTWRFATVSTRLFMIDMERFAKRIGSLELLRP DVKRRIRSLAYNQQPVSMPAEEVLSTNMMRSGVHRLDFLGTGTGMYSLHPPYRSPEFYAALASIVERIEKGNIPEGQLGD FDINGSMVDWGSALAAKTRSKRYAKALRHLIAANVGRFTKA >Mature_360_residues TMNAEMPLPPVQKALQINLHPFDAPHAALTLPHQLRVWGGQVDRILLTVDTGQVGAGRYKGNGFDSARQRLFDMLDEMQI NYPHLYVDIVDYSDAARSAVTQTFFSRSPIPYPAKAFDGGPFHVYFYGLKRANARYVLHMDSDMMFGGGSPSWFSEAVAL QKANPDALCITPFSGPPTVRGDLDISRHVGMPGVKNIPAPRKLPSRIPTWRFATVSTRLFMIDMERFAKRIGSLELLRPD VKRRIRSLAYNQQPVSMPAEEVLSTNMMRSGVHRLDFLGTGTGMYSLHPPYRSPEFYAALASIVERIEKGNIPEGQLGDF DINGSMVDWGSALAAKTRSKRYAKALRHLIAANVGRFTKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40229; Mature: 40098
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMNAEMPLPPVQKALQINLHPFDAPHAALTLPHQLRVWGGQVDRILLTVDTGQVGAGRY CCCCCCCCCCHHHHHHEEECCCCCCCCCEEECCHHEEECCCCEEEEEEEEECCCCCCCCC KGNGFDSARQRLFDMLDEMQINYPHLYVDIVDYSDAARSAVTQTFFSRSPIPYPAKAFDG CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCC GPFHVYFYGLKRANARYVLHMDSDMMFGGGSPSWFSEAVALQKANPDALCITPFSGPPTV CCEEEEEEEEECCCCEEEEEECCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC RGDLDISRHVGMPGVKNIPAPRKLPSRIPTWRFATVSTRLFMIDMERFAKRIGSLELLRP CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHEEEEEEEEHHHHHHHHCCCHHCCH DVKRRIRSLAYNQQPVSMPAEEVLSTNMMRSGVHRLDFLGTGTGMYSLHPPYRSPEFYAA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCHHHHHH LASIVERIEKGNIPEGQLGDFDINGSMVDWGSALAAKTRSKRYAKALRHLIAANVGRFTK HHHHHHHHHHCCCCCCCCCCEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC A C >Mature Secondary Structure TMNAEMPLPPVQKALQINLHPFDAPHAALTLPHQLRVWGGQVDRILLTVDTGQVGAGRY CCCCCCCCCHHHHHHEEECCCCCCCCCEEECCHHEEECCCCEEEEEEEEECCCCCCCCC KGNGFDSARQRLFDMLDEMQINYPHLYVDIVDYSDAARSAVTQTFFSRSPIPYPAKAFDG CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCC GPFHVYFYGLKRANARYVLHMDSDMMFGGGSPSWFSEAVALQKANPDALCITPFSGPPTV CCEEEEEEEEECCCCEEEEEECCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC RGDLDISRHVGMPGVKNIPAPRKLPSRIPTWRFATVSTRLFMIDMERFAKRIGSLELLRP CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHEEEEEEEEHHHHHHHHCCCHHCCH DVKRRIRSLAYNQQPVSMPAEEVLSTNMMRSGVHRLDFLGTGTGMYSLHPPYRSPEFYAA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCHHHHHH LASIVERIEKGNIPEGQLGDFDINGSMVDWGSALAAKTRSKRYAKALRHLIAANVGRFTK HHHHHHHHHHCCCCCCCCCCEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA