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The map label for this gene is xynA [H]

Identifier: 159185177

GI number: 159185177

Start: 2344447

End: 2345514

Strand: Reverse

Name: xynA [H]

Synonym: Atu2371

Alternate gene names: 159185177

Gene position: 2345514-2344447 (Counterclockwise)

Preceding gene: 159185179

Following gene: 15889643

Centisome position: 82.54

GC content: 61.24

Gene sequence:

>1068_bases
ATGCGGATCGGGCGGCGGAATTTTCTGGGTGGTGCGGCAAGCGCTGGCCTGTTGCATGCCGTGGCCGGGCCGGCCTTTGC
CGCGCAGAAGAAGGCTGCGATCAAAACCGCCCCCTATGGCGCCGCCATCTACCTGCCGGATCTTACCGCCGACAGCCGTA
TCGGCGAGGCGGTGGTGAAATATTGCTCGCGCATTACCCCCGTCACCGAAATGAAATGGGAGGTGATGCGGCCTTCGGCA
GAGGTTTTCGATTTCGCCGCTGCAGATGCACTCGCCAATTTCGCGCGCCAGCACAAGCTTTCCATGCATGGCCATCCGCT
GATCTGGTATGCCTCCAACGCGCCGTGGCTTGCCAGTGTCGGCGGCGCGAAGGTCGAGAAGCTGATGGAAACCCATATCG
TCACCGTGATGGAGCGATATAAGGATGTGATCCACAGCTGGGATGTCGTCAATGAACCGATCCCCGACGTGCCTGGCAAT
GTGCGTGCACGGCGCGATGCCTGGTATTACGGCGCCGGGCCTGACGCCATCAAGAAGGCTTTCGACATCGCCCATGCGGT
CGATCCGAAGGCGCAGCTCGTGCTCAACGAATATGACGTGGAATTTGCTGTCGAGAAATCGCCAGCCAAACGTGCGGCCT
TCCGCAATCTCATCCTCGAGCTGCTCGAAAAGGGCGCGCCGATCAACGCCGTCGGCCTGCAGGGGCATTTGCGTGGCGGC
TGGCCAATCGCCAAGGACGAGCTGGCGGCCTTCACGACGGAAATGCGCAGTTACGGTCTTGCCGTCATGGTGACGGAGCT
TGACGTGATGGACCAGACGCTGCCCACACCGGAGGCCGAGCGTGATATGCTGATCACCGGCCAGGTCCGCGAGTTTCTCG
AGGCCGCTTCTGCAGGCGGGCCGCTTTCTTCCATCACGACATGGGGCATTTCGGATCAATACAGCTGGATCCGCTGGGCC
TATCCACGCCGGGACGGCACCGCCAACCGGCCGCTGCCGCTCGACTGGAGTTTCAACGAAAAACCCATGATGGCCGTCAT
CAATGAATTCCGGAACCGTGGTGCATGA

Upstream 100 bases:

>100_bases
ATCTTTAATATCCTTTTGGCATGGTTGAAATGTTATGTTTTGAGAATAAGAGCGCGATGCATCCCTTCGGATGATGCGCT
GGGGTTGTGGAGGCGGGTTG

Downstream 100 bases:

>100_bases
CTATGAATGCTGAAATGCCGCTTCCTCCCGTACAAAAGGCGCTGCAAATCAACCTCCATCCTTTCGATGCTCCGCATGCG
GCCCTTACCCTGCCGCATCA

Product: endo-1,4-beta-xylanase

Products: NA

Alternate protein names: 1,4-beta-D-xylan xylanohydrolase; Endo-1,4-beta-xylanase [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MRIGRRNFLGGAASAGLLHAVAGPAFAAQKKAAIKTAPYGAAIYLPDLTADSRIGEAVVKYCSRITPVTEMKWEVMRPSA
EVFDFAAADALANFARQHKLSMHGHPLIWYASNAPWLASVGGAKVEKLMETHIVTVMERYKDVIHSWDVVNEPIPDVPGN
VRARRDAWYYGAGPDAIKKAFDIAHAVDPKAQLVLNEYDVEFAVEKSPAKRAAFRNLILELLEKGAPINAVGLQGHLRGG
WPIAKDELAAFTTEMRSYGLAVMVTELDVMDQTLPTPEAERDMLITGQVREFLEAASAGGPLSSITTWGISDQYSWIRWA
YPRRDGTANRPLPLDWSFNEKPMMAVINEFRNRGA

Sequences:

>Translated_355_residues
MRIGRRNFLGGAASAGLLHAVAGPAFAAQKKAAIKTAPYGAAIYLPDLTADSRIGEAVVKYCSRITPVTEMKWEVMRPSA
EVFDFAAADALANFARQHKLSMHGHPLIWYASNAPWLASVGGAKVEKLMETHIVTVMERYKDVIHSWDVVNEPIPDVPGN
VRARRDAWYYGAGPDAIKKAFDIAHAVDPKAQLVLNEYDVEFAVEKSPAKRAAFRNLILELLEKGAPINAVGLQGHLRGG
WPIAKDELAAFTTEMRSYGLAVMVTELDVMDQTLPTPEAERDMLITGQVREFLEAASAGGPLSSITTWGISDQYSWIRWA
YPRRDGTANRPLPLDWSFNEKPMMAVINEFRNRGA
>Mature_355_residues
MRIGRRNFLGGAASAGLLHAVAGPAFAAQKKAAIKTAPYGAAIYLPDLTADSRIGEAVVKYCSRITPVTEMKWEVMRPSA
EVFDFAAADALANFARQHKLSMHGHPLIWYASNAPWLASVGGAKVEKLMETHIVTVMERYKDVIHSWDVVNEPIPDVPGN
VRARRDAWYYGAGPDAIKKAFDIAHAVDPKAQLVLNEYDVEFAVEKSPAKRAAFRNLILELLEKGAPINAVGLQGHLRGG
WPIAKDELAAFTTEMRSYGLAVMVTELDVMDQTLPTPEAERDMLITGQVREFLEAASAGGPLSSITTWGISDQYSWIRWA
YPRRDGTANRPLPLDWSFNEKPMMAVINEFRNRGA

Specific function: Unknown

COG id: COG3693

COG function: function code G; Beta-1,4-xylanase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 10 (cellulase F) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 39133; Mature: 39133

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS00591 GLYCOSYL_HYDROL_F10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGRRNFLGGAASAGLLHAVAGPAFAAQKKAAIKTAPYGAAIYLPDLTADSRIGEAVVK
CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHHH
YCSRITPVTEMKWEVMRPSAEVFDFAAADALANFARQHKLSMHGHPLIWYASNAPWLASV
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECC
GGAKVEKLMETHIVTVMERYKDVIHSWDVVNEPIPDVPGNVRARRDAWYYGAGPDAIKKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEECCCHHHHHHH
FDIAHAVDPKAQLVLNEYDVEFAVEKSPAKRAAFRNLILELLEKGAPINAVGLQGHLRGG
HHHHHHCCCCHHEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
WPIAKDELAAFTTEMRSYGLAVMVTELDVMDQTLPTPEAERDMLITGQVREFLEAASAGG
CCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCC
PLSSITTWGISDQYSWIRWAYPRRDGTANRPLPLDWSFNEKPMMAVINEFRNRGA
CHHHHEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIGRRNFLGGAASAGLLHAVAGPAFAAQKKAAIKTAPYGAAIYLPDLTADSRIGEAVVK
CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHHH
YCSRITPVTEMKWEVMRPSAEVFDFAAADALANFARQHKLSMHGHPLIWYASNAPWLASV
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECC
GGAKVEKLMETHIVTVMERYKDVIHSWDVVNEPIPDVPGNVRARRDAWYYGAGPDAIKKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEECCCHHHHHHH
FDIAHAVDPKAQLVLNEYDVEFAVEKSPAKRAAFRNLILELLEKGAPINAVGLQGHLRGG
HHHHHHCCCCHHEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
WPIAKDELAAFTTEMRSYGLAVMVTELDVMDQTLPTPEAERDMLITGQVREFLEAASAGG
CCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCC
PLSSITTWGISDQYSWIRWAYPRRDGTANRPLPLDWSFNEKPMMAVINEFRNRGA
CHHHHEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8534104 [H]