Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889541
Identifier: 15889541
GI number: 15889541
Start: 2240176
End: 2241258
Strand: Direct
Name: 15889541
Synonym: Atu2266
Alternate gene names: NA
Gene position: 2240176-2241258 (Clockwise)
Preceding gene: 15889538
Following gene: 159185441
Centisome position: 78.84
GC content: 59.56
Gene sequence:
>1083_bases ATGCTCCGCATCGTCACCATTGCCGCCTGCTGCTTCATGGCCATTCCGGCCGCCGCTCAGACCCTGCCGCCGCCGGCCCT TCTCGGCCAGATCGTCGTGCCTTCGGGTCTCTCCATCAATGGCGTCGCCTTCGGCGGCATTTCGGATCTGGCTTTTGACA ACGAGACCGGTCGTTATTTCGCCATTTCCGATGATCGCGTGGAAAAAGGCCCGGCCCGTTATTACGAGCTGGAACTGGGC CTGACGGAAGGGGTGGCGACGCTCAATATCGCCGCCATGCACGAATTGAAGGACGAGACAGGCGCAGCCTTTGCGCCCAA GGGCATCGATGCGGAAGGCATCGCGCTCGACCGCAAGGACGGCAAGCTTTACTGGTCTTCCGAACGCGACCTGAAGAACC AGCCAGCACTTTATGTCTCCAATCTCGACGGCAGCAATGTCAAACGGCTGGAACTGCCAGACGCCTATCTCGTCGATGAG GCGAAGACCAAGGGCGTGCAGAACAATCTCGGCTTCGAAGGCCTGACGGTTACCCCCGGCTGGCTGATCGCCGCGACGGA AAACGCCCTGACCCAGGACGGCCAGAAGGCAACACCGCAGGCCGGCAGCCCGGCCCGCATTCTTGTCATCGACACGGCAA CACAAAAGCCTGTCGCCGAACATGTCTACGTCACCGAGGCGATCTCCAAGACGCCTACCGCCGCCGAGCCGAAATATAAT GATAACGGCCTCTCCGCCCTCACCGCCCTGCCGGATGGCCGCTTCGTGGCGGTTGAGCGCAATTTCGCGTCCGGCGTCGG CAATCATATCCGCTTTTTCATCGTCGACCTCGGCGGTGCGGAAAACATCCTCGGCAAGGACAAGATCGACGTGGCAAATG TGCGCGCCGTATCGAAGACGCCGTGGTTCGAAATCAACGAAGGCGATTTCGGTCTCGACATCGACAATATTGAAAGCCTG GCCTTCGGCCCGGTGGTGGATGGCAAGCAGATTTTCGTCATCGCCTCGGACGATAATTTCAATCCAGGCAAGCAGTTCAC CCAGTTTGTGGCCTTTGCCATTCCCGCTAATCTGGGTCAGTAA
Upstream 100 bases:
>100_bases TGAGCCACCGGACTTCAGGTACGGCTGCGTGCAAAACGTCATCAAAGTTTAGCGGCGGCGCGCTAATCCTCCCGGCAACA GCCACAGAGGAACCCTCGCC
Downstream 100 bases:
>100_bases AGTCGCTCAAGGCAGACTGCCGGCGCGGAACTTTCACCGGGCCGGCATCACAAACCGCGGTGAGATGCAGGCTCACCAGC GCAGCAGGCGTGAACCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MLRIVTIAACCFMAIPAAAQTLPPPALLGQIVVPSGLSINGVAFGGISDLAFDNETGRYFAISDDRVEKGPARYYELELG LTEGVATLNIAAMHELKDETGAAFAPKGIDAEGIALDRKDGKLYWSSERDLKNQPALYVSNLDGSNVKRLELPDAYLVDE AKTKGVQNNLGFEGLTVTPGWLIAATENALTQDGQKATPQAGSPARILVIDTATQKPVAEHVYVTEAISKTPTAAEPKYN DNGLSALTALPDGRFVAVERNFASGVGNHIRFFIVDLGGAENILGKDKIDVANVRAVSKTPWFEINEGDFGLDIDNIESL AFGPVVDGKQIFVIASDDNFNPGKQFTQFVAFAIPANLGQ
Sequences:
>Translated_360_residues MLRIVTIAACCFMAIPAAAQTLPPPALLGQIVVPSGLSINGVAFGGISDLAFDNETGRYFAISDDRVEKGPARYYELELG LTEGVATLNIAAMHELKDETGAAFAPKGIDAEGIALDRKDGKLYWSSERDLKNQPALYVSNLDGSNVKRLELPDAYLVDE AKTKGVQNNLGFEGLTVTPGWLIAATENALTQDGQKATPQAGSPARILVIDTATQKPVAEHVYVTEAISKTPTAAEPKYN DNGLSALTALPDGRFVAVERNFASGVGNHIRFFIVDLGGAENILGKDKIDVANVRAVSKTPWFEINEGDFGLDIDNIESL AFGPVVDGKQIFVIASDDNFNPGKQFTQFVAFAIPANLGQ >Mature_360_residues MLRIVTIAACCFMAIPAAAQTLPPPALLGQIVVPSGLSINGVAFGGISDLAFDNETGRYFAISDDRVEKGPARYYELELG LTEGVATLNIAAMHELKDETGAAFAPKGIDAEGIALDRKDGKLYWSSERDLKNQPALYVSNLDGSNVKRLELPDAYLVDE AKTKGVQNNLGFEGLTVTPGWLIAATENALTQDGQKATPQAGSPARILVIDTATQKPVAEHVYVTEAISKTPTAAEPKYN DNGLSALTALPDGRFVAVERNFASGVGNHIRFFIVDLGGAENILGKDKIDVANVRAVSKTPWFEINEGDFGLDIDNIESL AFGPVVDGKQIFVIASDDNFNPGKQFTQFVAFAIPANLGQ
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38399; Mature: 38399
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIVTIAACCFMAIPAAAQTLPPPALLGQIVVPSGLSINGVAFGGISDLAFDNETGRYF CEEEEEHHHHHHHHCCHHHHCCCCHHHHCEEECCCCCEECCEEECCCCHHEECCCCCCEE AISDDRVEKGPARYYELELGLTEGVATLNIAAMHELKDETGAAFAPKGIDAEGIALDRKD EEECCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHCCCCEECCCCCCCCCEEEECCC GKLYWSSERDLKNQPALYVSNLDGSNVKRLELPDAYLVDEAKTKGVQNNLGFEGLTVTPG CEEEECCCCCCCCCCCEEEECCCCCCEEEEECCCCEEECCHHHCCCCCCCCCCEEEECCC WLIAATENALTQDGQKATPQAGSPARILVIDTATQKPVAEHVYVTEAISKTPTAAEPKYN EEEEECCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHEEEEHHHHCCCCCCCCCCC DNGLSALTALPDGRFVAVERNFASGVGNHIRFFIVDLGGAENILGKDKIDVANVRAVSKT CCCCEEEEECCCCCEEEEECCHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCC PWFEINEGDFGLDIDNIESLAFGPVVDGKQIFVIASDDNFNPGKQFTQFVAFAIPANLGQ CCEEECCCCCCCCHHCCCCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHEECCCCCC >Mature Secondary Structure MLRIVTIAACCFMAIPAAAQTLPPPALLGQIVVPSGLSINGVAFGGISDLAFDNETGRYF CEEEEEHHHHHHHHCCHHHHCCCCHHHHCEEECCCCCEECCEEECCCCHHEECCCCCCEE AISDDRVEKGPARYYELELGLTEGVATLNIAAMHELKDETGAAFAPKGIDAEGIALDRKD EEECCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHCCCCEECCCCCCCCCEEEECCC GKLYWSSERDLKNQPALYVSNLDGSNVKRLELPDAYLVDEAKTKGVQNNLGFEGLTVTPG CEEEECCCCCCCCCCCEEEECCCCCCEEEEECCCCEEECCHHHCCCCCCCCCCEEEECCC WLIAATENALTQDGQKATPQAGSPARILVIDTATQKPVAEHVYVTEAISKTPTAAEPKYN EEEEECCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHEEEEHHHHCCCCCCCCCCC DNGLSALTALPDGRFVAVERNFASGVGNHIRFFIVDLGGAENILGKDKIDVANVRAVSKT CCCCEEEEECCCCCEEEEECCHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCC PWFEINEGDFGLDIDNIESLAFGPVVDGKQIFVIASDDNFNPGKQFTQFVAFAIPANLGQ CCEEECCCCCCCCHHCCCCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA