Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889538
Identifier: 15889538
GI number: 15889538
Start: 2235499
End: 2236449
Strand: Direct
Name: 15889538
Synonym: Atu2263
Alternate gene names: NA
Gene position: 2235499-2236449 (Clockwise)
Preceding gene: 159185127
Following gene: 15889541
Centisome position: 78.67
GC content: 60.15
Gene sequence:
>951_bases ATGTTTAAACTTGCGCATATTTCAGACGTCCATTTAGGGCCACTGCCAAAGCTCACTTTCCGGGAACTTGCATCCAAGCG CATCACCGGTTTCGTCAACTGGCACCGCAACCGCCGCAAGCATCTCTTCACCGATACGCTGGAAAAACTGCTCGACGATC TCGAGACCAAATCACCGGATCATCTGGCTATTACCGGCGATCTCGTCAATCTTGCGACCGGCATCGAAATCCGCGCCGCC GCCGACTGGCTGGAGGAAGTGGGCGATCCCGAAAAAACCTCAGTCGTTCCCGGCAATCACGACGCCTATGTCTCTGGCGC GCACGACAAGGCCATGCAGGCCTGGTATCCCTACGTGCGCGGTGATGGCGATCCTGCGGAATGGGACGATGACCGCAAGA TTTTCCCCTACATGCGCGTACGCGGCCCGGTGGCGCTGATCGGCTGCTCGACCTCGATTGCGACGCCGCCCTTTTCTGCA ACAGGATATTTCGGCAACCGGCAGGCGCGCGCCACGGCGGAACTTCTGAAAAAAGCTGGCGAGCAGGGACTGTTCCGGGT GGTGATGATCCATCATCCGCCGATCCGGGGTGCGGCTGCCGCCCATAAACGCATGTTCGGCATGCGCCGTTTTGCAGCCG CGCTCGGCGTCGGCGGCGCGGAACTCGTGCTGCATGGTCATACGCATTTGAATACGGTTTATTGGCTGAATACGCATCAC GGGGAGGACCACATCCCCGTCGTCGGCATTTCCTCCGCCAGCCAAGGTCCGGGCGGCGAGAAACCGCGGGCGGCCTATAA TCTCTTCCACATTTCCGGTGGGCCGGGCACGTGGAACGTTGCCTGCGAGCGGCACAGCCTCAATGAGACGGGAACGGGTG TGGCGCTTGAGGATATCAGGGTGTTTTATGAGAATGGGCGGCCGCTGGGGTTTTCGCGGTTGGGGGAGTAG
Upstream 100 bases:
>100_bases GACGGGCCTTCTGCCCTGTTGTCTCGTCATTCACCCTGGTTTCTCCGCGCTGGCAGGCTTTTATTGGACGTGCCACATAT CATAGGTTATCTCTGCCGCC
Downstream 100 bases:
>100_bases AAGTCGGGCCGTGATGCCGGAGGCTGGGGTTCACCCCCCTCTGCCCTGCCGGGCATCTCCCCCACAAGGAGGGAGATCAG CAAGGAGCGCCACCACCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Metallo-Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Phosphoesterase Protein; Phosphoesterase; Phosphohydrolase Icc Family; Phosphohydrolase; Icc Family Phosphohydrolase; Phosphatase Protein
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MFKLAHISDVHLGPLPKLTFRELASKRITGFVNWHRNRRKHLFTDTLEKLLDDLETKSPDHLAITGDLVNLATGIEIRAA ADWLEEVGDPEKTSVVPGNHDAYVSGAHDKAMQAWYPYVRGDGDPAEWDDDRKIFPYMRVRGPVALIGCSTSIATPPFSA TGYFGNRQARATAELLKKAGEQGLFRVVMIHHPPIRGAAAAHKRMFGMRRFAAALGVGGAELVLHGHTHLNTVYWLNTHH GEDHIPVVGISSASQGPGGEKPRAAYNLFHISGGPGTWNVACERHSLNETGTGVALEDIRVFYENGRPLGFSRLGE
Sequences:
>Translated_316_residues MFKLAHISDVHLGPLPKLTFRELASKRITGFVNWHRNRRKHLFTDTLEKLLDDLETKSPDHLAITGDLVNLATGIEIRAA ADWLEEVGDPEKTSVVPGNHDAYVSGAHDKAMQAWYPYVRGDGDPAEWDDDRKIFPYMRVRGPVALIGCSTSIATPPFSA TGYFGNRQARATAELLKKAGEQGLFRVVMIHHPPIRGAAAAHKRMFGMRRFAAALGVGGAELVLHGHTHLNTVYWLNTHH GEDHIPVVGISSASQGPGGEKPRAAYNLFHISGGPGTWNVACERHSLNETGTGVALEDIRVFYENGRPLGFSRLGE >Mature_316_residues MFKLAHISDVHLGPLPKLTFRELASKRITGFVNWHRNRRKHLFTDTLEKLLDDLETKSPDHLAITGDLVNLATGIEIRAA ADWLEEVGDPEKTSVVPGNHDAYVSGAHDKAMQAWYPYVRGDGDPAEWDDDRKIFPYMRVRGPVALIGCSTSIATPPFSA TGYFGNRQARATAELLKKAGEQGLFRVVMIHHPPIRGAAAAHKRMFGMRRFAAALGVGGAELVLHGHTHLNTVYWLNTHH GEDHIPVVGISSASQGPGGEKPRAAYNLFHISGGPGTWNVACERHSLNETGTGVALEDIRVFYENGRPLGFSRLGE
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34704; Mature: 34704
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKLAHISDVHLGPLPKLTFRELASKRITGFVNWHRNRRKHLFTDTLEKLLDDLETKSPD CEEECEECCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC HLAITGDLVNLATGIEIRAAADWLEEVGDPEKTSVVPGNHDAYVSGAHDKAMQAWYPYVR EEEEECCHHHHHCCCEEEHHHHHHHHHCCCCCCEECCCCCCCEEECCCHHHHHHHCCEEC GDGDPAEWDDDRKIFPYMRVRGPVALIGCSTSIATPPFSATGYFGNRQARATAELLKKAG CCCCCCCCCCCCEECCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC EQGLFRVVMIHHPPIRGAAAAHKRMFGMRRFAAALGVGGAELVLHGHTHLNTVYWLNTHH CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCC GEDHIPVVGISSASQGPGGEKPRAAYNLFHISGGPGTWNVACERHSLNETGTGVALEDIR CCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEHHHHH VFYENGRPLGFSRLGE EEEECCCCCCHHHCCC >Mature Secondary Structure MFKLAHISDVHLGPLPKLTFRELASKRITGFVNWHRNRRKHLFTDTLEKLLDDLETKSPD CEEECEECCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC HLAITGDLVNLATGIEIRAAADWLEEVGDPEKTSVVPGNHDAYVSGAHDKAMQAWYPYVR EEEEECCHHHHHCCCEEEHHHHHHHHHCCCCCCEECCCCCCCEEECCCHHHHHHHCCEEC GDGDPAEWDDDRKIFPYMRVRGPVALIGCSTSIATPPFSATGYFGNRQARATAELLKKAG CCCCCCCCCCCCEECCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC EQGLFRVVMIHHPPIRGAAAAHKRMFGMRRFAAALGVGGAELVLHGHTHLNTVYWLNTHH CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCC GEDHIPVVGISSASQGPGGEKPRAAYNLFHISGGPGTWNVACERHSLNETGTGVALEDIR CCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEHHHHH VFYENGRPLGFSRLGE EEEECCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA