Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889048
Identifier: 15889048
GI number: 15889048
Start: 1731394
End: 1732374
Strand: Direct
Name: 15889048
Synonym: Atu1745
Alternate gene names: NA
Gene position: 1731394-1732374 (Clockwise)
Preceding gene: 159184895
Following gene: 15889053
Centisome position: 60.93
GC content: 59.94
Gene sequence:
>981_bases ATGTCGGCAATCAAAATCGCGGCACGTCTGGCCATTGCGTTCGCCGCGATTGGCGTTTTATCGCAAGCAGCCTTTTCGCA GGATGCCTTTAAAGACTTCAAGCAGCTCGGCGGCACGCCGAAAATGCCCAAACTCAACGCTTTCACTGCCCCTTCCGCCC CCAATGCCCCGACGAGCACCGCCCGCGATATCGCCATGGAAGCGAAGTTGACGAGCGAAGGCGAAGCGGTGAAGGAAGGC CTCTCCTGGCGTGTCTTCAGCCCCATTCCGGGCACTGACGGCAAGCTGCCGATGCTGGCAAGCTCCGAGGGCGGTTCGGC GCAGTTTCATCTCGTGCCTGGCGAATATTTCGTCAACGTTGCCTTCGGCCGTGCGGGCGTTACCAAGAAGCTCAACGTAC CGGCCTCCGGCAATGTCCAGAAACAGGTGCTGATCCTCGATGCCGGCGGCTTCGTGCTGAATGCGATTGCAGGCTCCGAC AAGCAGATTTCCGGCAACCAGCTGAAATTCTCCGTCTATTCCTCCGACGCCCGTCCGGATGGCGAACGCGGCCTCGTGAT GGCCGATATCAAGCCCAACACCATCGTGCGGCTGAATGCCGGCACCTATCATGTGGTTTCCGAATATGGCAACGTCAACG CGGTGGTGCGTGCCGATATCCAGGTCGAAGCCGGCAAGCTGACCGAAGCGACGCTGCAGCATCAGGCGGCACAGATCACC CTGAAACTCGTGTCCGAACAGGGCGGCGAGGCCATTGCCGATACGGCCTGGTCGGTGCTGAACGGCGGCGGCGACGTGGT CAATGAAAGCGTCAGCGCCTTTTCGACCATGGTGCTGGCCGAAGGCGAATATACCGCCATCGCCCGCAACAAGGACAAGG TGTATCAGCGCAACTTCAAGGTCACGTCGGGCCGGGATTCGGATGTGGAAGTGCTGATGAAAGACCAGGCGCCGGAAGAC ATGACCGGGGATTTTGAGTAG
Upstream 100 bases:
>100_bases TCTTCCATTCTGCTGTCATCGCGAAACTAGGGCCTTGAAATAGCCATGGCATTGGTTTTGAAGTGATCCGGGAAAAACAA GAAGTCAATCGGTATCGAAA
Downstream 100 bases:
>100_bases GTTTCCACTACAGCCACGGTGCTTGAAGGATCGTTTTCCTACATTTACGCTCGACGTCCTCCCCTAATCACGCCCAATCA AATCGAGACGTTGCAGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSAIKIAARLAIAFAAIGVLSQAAFSQDAFKDFKQLGGTPKMPKLNAFTAPSAPNAPTSTARDIAMEAKLTSEGEAVKEG LSWRVFSPIPGTDGKLPMLASSEGGSAQFHLVPGEYFVNVAFGRAGVTKKLNVPASGNVQKQVLILDAGGFVLNAIAGSD KQISGNQLKFSVYSSDARPDGERGLVMADIKPNTIVRLNAGTYHVVSEYGNVNAVVRADIQVEAGKLTEATLQHQAAQIT LKLVSEQGGEAIADTAWSVLNGGGDVVNESVSAFSTMVLAEGEYTAIARNKDKVYQRNFKVTSGRDSDVEVLMKDQAPED MTGDFE
Sequences:
>Translated_326_residues MSAIKIAARLAIAFAAIGVLSQAAFSQDAFKDFKQLGGTPKMPKLNAFTAPSAPNAPTSTARDIAMEAKLTSEGEAVKEG LSWRVFSPIPGTDGKLPMLASSEGGSAQFHLVPGEYFVNVAFGRAGVTKKLNVPASGNVQKQVLILDAGGFVLNAIAGSD KQISGNQLKFSVYSSDARPDGERGLVMADIKPNTIVRLNAGTYHVVSEYGNVNAVVRADIQVEAGKLTEATLQHQAAQIT LKLVSEQGGEAIADTAWSVLNGGGDVVNESVSAFSTMVLAEGEYTAIARNKDKVYQRNFKVTSGRDSDVEVLMKDQAPED MTGDFE >Mature_325_residues SAIKIAARLAIAFAAIGVLSQAAFSQDAFKDFKQLGGTPKMPKLNAFTAPSAPNAPTSTARDIAMEAKLTSEGEAVKEGL SWRVFSPIPGTDGKLPMLASSEGGSAQFHLVPGEYFVNVAFGRAGVTKKLNVPASGNVQKQVLILDAGGFVLNAIAGSDK QISGNQLKFSVYSSDARPDGERGLVMADIKPNTIVRLNAGTYHVVSEYGNVNAVVRADIQVEAGKLTEATLQHQAAQITL KLVSEQGGEAIADTAWSVLNGGGDVVNESVSAFSTMVLAEGEYTAIARNKDKVYQRNFKVTSGRDSDVEVLMKDQAPEDM TGDFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34402; Mature: 34271
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIKIAARLAIAFAAIGVLSQAAFSQDAFKDFKQLGGTPKMPKLNAFTAPSAPNAPTST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCH ARDIAMEAKLTSEGEAVKEGLSWRVFSPIPGTDGKLPMLASSEGGSAQFHLVPGEYFVNV HHHHEEEEEECCCCHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCEEEEEECCCEEEEE AFGRAGVTKKLNVPASGNVQKQVLILDAGGFVLNAIAGSDKQISGNQLKFSVYSSDARPD EECCCCCCEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCEECCCEEEEEEEECCCCCC GERGLVMADIKPNTIVRLNAGTYHVVSEYGNVNAVVRADIQVEAGKLTEATLQHQAAQIT CCCCEEEEECCCCEEEEECCCEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHEE LKLVSEQGGEAIADTAWSVLNGGGDVVNESVSAFSTMVLAEGEYTAIARNKDKVYQRNFK EEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCEEEEECCCCHHHHCCEE VTSGRDSDVEVLMKDQAPEDMTGDFE EECCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure SAIKIAARLAIAFAAIGVLSQAAFSQDAFKDFKQLGGTPKMPKLNAFTAPSAPNAPTST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCH ARDIAMEAKLTSEGEAVKEGLSWRVFSPIPGTDGKLPMLASSEGGSAQFHLVPGEYFVNV HHHHEEEEEECCCCHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCEEEEEECCCEEEEE AFGRAGVTKKLNVPASGNVQKQVLILDAGGFVLNAIAGSDKQISGNQLKFSVYSSDARPD EECCCCCCEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCEECCCEEEEEEEECCCCCC GERGLVMADIKPNTIVRLNAGTYHVVSEYGNVNAVVRADIQVEAGKLTEATLQHQAAQIT CCCCEEEEECCCCEEEEECCCEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHEE LKLVSEQGGEAIADTAWSVLNGGGDVVNESVSAFSTMVLAEGEYTAIARNKDKVYQRNFK EEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCEEEEECCCCHHHHCCEE VTSGRDSDVEVLMKDQAPEDMTGDFE EECCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA