Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is folE
Identifier: 15889053
GI number: 15889053
Start: 1736303
End: 1736929
Strand: Direct
Name: folE
Synonym: Atu1749
Alternate gene names: 15889053
Gene position: 1736303-1736929 (Clockwise)
Preceding gene: 15889048
Following gene: 159184898
Centisome position: 61.1
GC content: 60.77
Gene sequence:
>627_bases ATGGATGCGATCGTGAAGAATTTCCCCGGCGCTGGCGCAAAACCAGACGTGGCCGAAGCTCGCCCAAGCCAGGCCGAAGC GGAAGAAGCCGTGCGCGTTCTCCTGCGCTGGGCAGGAGAAAATCCCGCCCGCGAAGGACTTCTGGATACGCCGAAGCGCG TCGCCAAGGCCTATCGCGAGCTTTTTGCCGGTTATGAGCTGAATGTTCAGGACGTGCTTGGCACGACCTTCGAGGAAGTC GGCGGTTATGACGATGTGGTGCTGGTGCGCGACATCCCCTTCTTCTCCCATTGCGAGCACCATATGGTGCCGATCGTCGG CAAGGCGCATGTCGCCTATCTTCCGGCCGGCCGTGTGCTTGGCCTGTCGAAGATCGCCCGCGTCGTCGAAATCTTCGGCC GCCGCCTGCAGACGCAGGAAAACATGACGGCGCAGATCGCAAGATCGATCGAAGAAACGCTGAAACCGCGTGGCGTAGCC GTCATGATCGACGCGGAACATATGTGCATGTCCATGCGCGGCGTAAACAAGCAAGGGTCCACGACGCTGACCACCAGCTT CACCGGCACGTTCAAGAACGATCCGGCCGAGCAGGTGCGCTTCATGACCATGGTGCGGAACCGCTGA
Upstream 100 bases:
>100_bases CAAAATGCTGTAAAACAACCAGATAGCAGCAGCTGCGAACATGAGTTCGCGATGAAAAACGAATTCAGGTGCGGCCTTTA CCCGCATCGGGAGAGACGGA
Downstream 100 bases:
>100_bases ACATCGGACCGGAAACTGTAGCGCGGGTTTCCTGAAACCCGCTGCTCAGACAAAATTTTGGAGTGGCGGACTGATCCCAT CGTCTCCGCCGCTTTGAAAC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MDAIVKNFPGAGAKPDVAEARPSQAEAEEAVRVLLRWAGENPAREGLLDTPKRVAKAYRELFAGYELNVQDVLGTTFEEV GGYDDVVLVRDIPFFSHCEHHMVPIVGKAHVAYLPAGRVLGLSKIARVVEIFGRRLQTQENMTAQIARSIEETLKPRGVA VMIDAEHMCMSMRGVNKQGSTTLTTSFTGTFKNDPAEQVRFMTMVRNR
Sequences:
>Translated_208_residues MDAIVKNFPGAGAKPDVAEARPSQAEAEEAVRVLLRWAGENPAREGLLDTPKRVAKAYRELFAGYELNVQDVLGTTFEEV GGYDDVVLVRDIPFFSHCEHHMVPIVGKAHVAYLPAGRVLGLSKIARVVEIFGRRLQTQENMTAQIARSIEETLKPRGVA VMIDAEHMCMSMRGVNKQGSTTLTTSFTGTFKNDPAEQVRFMTMVRNR >Mature_208_residues MDAIVKNFPGAGAKPDVAEARPSQAEAEEAVRVLLRWAGENPAREGLLDTPKRVAKAYRELFAGYELNVQDVLGTTFEEV GGYDDVVLVRDIPFFSHCEHHMVPIVGKAHVAYLPAGRVLGLSKIARVVEIFGRRLQTQENMTAQIARSIEETLKPRGVA VMIDAEHMCMSMRGVNKQGSTTLTTSFTGTFKNDPAEQVRFMTMVRNR
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=179, Percent_Identity=50.2793296089386, Blast_Score=187, Evalue=6e-48, Organism=Homo sapiens, GI4503949, Length=179, Percent_Identity=50.2793296089386, Blast_Score=187, Evalue=6e-48, Organism=Homo sapiens, GI66932970, Length=148, Percent_Identity=48.6486486486487, Blast_Score=142, Evalue=2e-34, Organism=Homo sapiens, GI66932972, Length=137, Percent_Identity=51.8248175182482, Blast_Score=142, Evalue=2e-34, Organism=Escherichia coli, GI1788476, Length=176, Percent_Identity=40.9090909090909, Blast_Score=117, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17560486, Length=180, Percent_Identity=45, Blast_Score=177, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6321706, Length=181, Percent_Identity=45.8563535911602, Blast_Score=172, Evalue=3e-44, Organism=Drosophila melanogaster, GI24656782, Length=180, Percent_Identity=47.7777777777778, Blast_Score=175, Evalue=2e-44, Organism=Drosophila melanogaster, GI24656796, Length=180, Percent_Identity=47.7777777777778, Blast_Score=174, Evalue=2e-44, Organism=Drosophila melanogaster, GI24656791, Length=180, Percent_Identity=47.7777777777778, Blast_Score=174, Evalue=3e-44,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_AGRT5 (Q8UEK8)
Other databases:
- EMBL: AE007869 - PIR: AF2791 - PIR: F97570 - RefSeq: NP_354734.1 - ProteinModelPortal: Q8UEK8 - SMR: Q8UEK8 - STRING: Q8UEK8 - GeneID: 1133787 - GenomeReviews: AE007869_GR - KEGG: atu:Atu1749 - eggNOG: COG0302 - HOGENOM: HBG370191 - OMA: LTTTFTG - PhylomeDB: Q8UEK8 - ProtClustDB: PRK09347 - BioCyc: ATUM176299-1:ATU1749-MONOMER - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 - TIGRFAMs: TIGR00063
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 23032; Mature: 23032
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAIVKNFPGAGAKPDVAEARPSQAEAEEAVRVLLRWAGENPAREGLLDTPKRVAKAYRE CCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHH LFAGYELNVQDVLGTTFEEVGGYDDVVLVRDIPFFSHCEHHMVPIVGKAHVAYLPAGRVL HHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCEEECCCEEEEECCCHHH GLSKIARVVEIFGRRLQTQENMTAQIARSIEETLKPRGVAVMIDAEHMCMSMRGVNKQGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCC TTLTTSFTGTFKNDPAEQVRFMTMVRNR EEEEEEECCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDAIVKNFPGAGAKPDVAEARPSQAEAEEAVRVLLRWAGENPAREGLLDTPKRVAKAYRE CCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHH LFAGYELNVQDVLGTTFEEVGGYDDVVLVRDIPFFSHCEHHMVPIVGKAHVAYLPAGRVL HHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCEEECCCEEEEECCCHHH GLSKIARVVEIFGRRLQTQENMTAQIARSIEETLKPRGVAVMIDAEHMCMSMRGVNKQGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCC TTLTTSFTGTFKNDPAEQVRFMTMVRNR EEEEEEECCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194