Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889023
Identifier: 15889023
GI number: 15889023
Start: 1703179
End: 1703496
Strand: Reverse
Name: 15889023
Synonym: Atu1716
Alternate gene names: NA
Gene position: 1703496-1703179 (Counterclockwise)
Preceding gene: 159184884
Following gene: 15889022
Centisome position: 59.95
GC content: 50.0
Gene sequence:
>318_bases TTGCAGAAAGTGAAAACGGGTTTGGATTCAGCGTTTAAGCAAGTAATACGGGAATTTCGCCCGGCTTTCTTGTTTGGCGC TGACCGGCAGATAACGGAATGCCGTTATGTTGCCGGAAATTATGCCTATATCTGTCTCACTGGAAAATTAGGGCAATCGC CGCAAAAGACCACCGGTGGTGCGCTGAAAAGTGCTGCCGGAAAGACGCAGTGTGTTCGAAAAATCGCGACCCGGCGGGGT TCGGCTTTGCAGTATTCCGCAAGTATTGGCTATATGCCGGGAAGAGTGAGAGAAGTTCGCCGAAATGCTGAAATGTGA
Upstream 100 bases:
>100_bases GGCATATCTGTCCATTTCCCGCCACAAACAGAGTGCTTGGCTTATGTTTAAGAGCGCGGGAATGGAAGAACATGCAGGCG TTTGATGTGGGCCTGCGGAG
Downstream 100 bases:
>100_bases AGCCAACGTTTTAAAGCCGCTCCTTATGGGCATGTTGCTTGCGTCGCTCGCAATGCCGGTGCTGGCTTTTGACATTAATG CGGGCGTGACCAAGGAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MQKVKTGLDSAFKQVIREFRPAFLFGADRQITECRYVAGNYAYICLTGKLGQSPQKTTGGALKSAAGKTQCVRKIATRRG SALQYSASIGYMPGRVREVRRNAEM
Sequences:
>Translated_105_residues MQKVKTGLDSAFKQVIREFRPAFLFGADRQITECRYVAGNYAYICLTGKLGQSPQKTTGGALKSAAGKTQCVRKIATRRG SALQYSASIGYMPGRVREVRRNAEM >Mature_105_residues MQKVKTGLDSAFKQVIREFRPAFLFGADRQITECRYVAGNYAYICLTGKLGQSPQKTTGGALKSAAGKTQCVRKIATRRG SALQYSASIGYMPGRVREVRRNAEM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11583; Mature: 11583
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKVKTGLDSAFKQVIREFRPAFLFGADRQITECRYVAGNYAYICLTGKLGQSPQKTTGG CCHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHEEECCCEEEEEEECCCCCCCCCCCCC ALKSAAGKTQCVRKIATRRGSALQYSASIGYMPGRVREVRRNAEM HHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MQKVKTGLDSAFKQVIREFRPAFLFGADRQITECRYVAGNYAYICLTGKLGQSPQKTTGG CCHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHEEECCCEEEEEEECCCCCCCCCCCCC ALKSAAGKTQCVRKIATRRGSALQYSASIGYMPGRVREVRRNAEM HHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA