Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is pyrG [H]
Identifier: 15888931
GI number: 15888931
Start: 1602527
End: 1604263
Strand: Reverse
Name: pyrG [H]
Synonym: Atu1618
Alternate gene names: 15888931
Gene position: 1604263-1602527 (Counterclockwise)
Preceding gene: 159184841
Following gene: 15888928
Centisome position: 56.46
GC content: 59.36
Gene sequence:
>1737_bases TTGTTCGCATTCCGGCTCGCCCCATCGCAGATTCGTCAACAGCGAATTTTCGAAACAATGAAATTTGGGCTGGCGGAATC AGAGGTAAAAAGGTATCCGGTGAATCCCATGGCGCGATATGTATTCATCACAGGCGGCGTGGTCTCCTCTCTCGGTAAGG GCATCGCAGCTGCGGCACTCGGAGCTTTGCTGCAATCCCGTGGTTATCGGGTGCGGCTTCGCAAACTCGACCCTTATCTG AACGTTGATCCCGGCACCATGAGCCCGACACAGCACGGCGAAGTGTTCGTGACGGATGACGGTGCCGAGACGGACCTCGA CCTTGGCCACTATGAACGCTTTACCGGGCGTTCGGCCACCAAGACCGACAACATCACCACCGGTCGCATTTACAAGAACA TCATCGACAAGGAACGCCGCGGCGACTATCTCGGCGCGACGGTACAGGTCATTCCGCATGTCACCAACGAGATCAAGGAT TTCGTGACCGAAGGCAATGACGATTACGACTTCGTCATCTGCGAAATCGGCGGCACGGTGGGTGATATCGAGGCGATGCC GTTCATGGAGGCGATCCGCCAGCTCGGTAACGACCTGCCGCGCGGCACCGCAATCTATGTTCATCTGACGCTGATGCCTT ACATTCCGGCGGCCGGCGAATTGAAGACAAAGCCGACCCAGCATTCCGTGAAGGAACTGCAGGCGCTTGGCATTCATCCC GACATCCTGCTGGTGCGCGCCGACCGGGAAATCCCGGAAGCGGAACGCCGCAAGCTCTCGCTGTTCTGCAACGTGCGTCC GTCCGCCGTTATTCAGGCGCTGGATGTTGCCAACATCTATGACGTTCCGATCGCCTACCACAATGAAGGTCTCGATTCGG AAGTGCTGGCCGCCTTCGGCATCGAACCGGCGCCGAAGCCGCGTCTGGAACAGTGGGAAGAGGTCTGCAACCGCATCCGC ACGCCGGAAGGCGAGGTAACGATTGCGATCGTCGGCAAATATACCGGCCTCAAGGATGCCTACAAGTCGCTGATCGAGGC GCTGCATCACGGTGGCTTCGCCAACCGCGTCAAGGTTAAGCTGGAGTGGATCGAGTCGGAAGTCTTCGAAAAGGAAGATC CGACGCCTTATCTCGAAAAGGTCAACGGCATTCTGGTGCCGGGCGGTTTCGGCGAGCGCGGTTCCGAAGGCAAGATCATG GCGGCGCAGTTCGCCCGTGAGCGCAACGTGCCCTATTTCGGCATCTGCTTCGGCATGCAGATGGCGGTCGTGGAAGCGGC CCGACATCTCGCCGGCATCGAAAATGCCTCGTCCACCGAATTCGGTCCCACGGCGGAACCCGTCGTTGGCCTGATGACCG AATGGGTGAAGGGCAACGAGCTGGAGAAGCGCTCCACCAAGGGCGATCTCGGCGGCACCATGCGTCTCGGCGCCTACAAG GCGGCGCTGAAGAAAGACACCAAGATCGCCGAAATCTATGGCACCACTGATATTTCCGAGCGCCACCGCCACCGCTACGA GGTGAATGTGGACTACAAGGACCGGCTGGAAGAGTGCGGCTTGGTCTTCTCGGGCATGTCTCCCGATGGTGTCCTGCCGG AGACGGTGGAATATCCTGACCATCCGTGGTTTATCGGCGTGCAATACCACCCGGAACTGAAGAGCCGCCCGCTCGACCCG CATCCGCTTTTCGCCAGCTTCGTCGAAGCGGCGGTGGAGCAGAGCCGGCTGGTTTGA
Upstream 100 bases:
>100_bases GGCCCCGGCGCAGCCCGCCGATCCGAACGCCGTTCCGACCGGTCAATAAGCCCGGTTTTGATTTAACGCTCCGGCAGGCC AAAAGCCTGCCGGTTTTCTT
Downstream 100 bases:
>100_bases CGGTTTGAATGATACAAAAAAGGGCCGCGTTTGCGGTCCTTTTTTGTTTGGCGAACAGACTTTCCGTCCTGCAATCATGG TTTGTCGGGATCGGGATTAC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MFAFRLAPSQIRQQRIFETMKFGLAESEVKRYPVNPMARYVFITGGVVSSLGKGIAAAALGALLQSRGYRVRLRKLDPYL NVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTNEIKD FVTEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLPRGTAIYVHLTLMPYIPAAGELKTKPTQHSVKELQALGIHP DILLVRADREIPEAERRKLSLFCNVRPSAVIQALDVANIYDVPIAYHNEGLDSEVLAAFGIEPAPKPRLEQWEEVCNRIR TPEGEVTIAIVGKYTGLKDAYKSLIEALHHGGFANRVKVKLEWIESEVFEKEDPTPYLEKVNGILVPGGFGERGSEGKIM AAQFARERNVPYFGICFGMQMAVVEAARHLAGIENASSTEFGPTAEPVVGLMTEWVKGNELEKRSTKGDLGGTMRLGAYK AALKKDTKIAEIYGTTDISERHRHRYEVNVDYKDRLEECGLVFSGMSPDGVLPETVEYPDHPWFIGVQYHPELKSRPLDP HPLFASFVEAAVEQSRLV
Sequences:
>Translated_578_residues MFAFRLAPSQIRQQRIFETMKFGLAESEVKRYPVNPMARYVFITGGVVSSLGKGIAAAALGALLQSRGYRVRLRKLDPYL NVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTNEIKD FVTEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLPRGTAIYVHLTLMPYIPAAGELKTKPTQHSVKELQALGIHP DILLVRADREIPEAERRKLSLFCNVRPSAVIQALDVANIYDVPIAYHNEGLDSEVLAAFGIEPAPKPRLEQWEEVCNRIR TPEGEVTIAIVGKYTGLKDAYKSLIEALHHGGFANRVKVKLEWIESEVFEKEDPTPYLEKVNGILVPGGFGERGSEGKIM AAQFARERNVPYFGICFGMQMAVVEAARHLAGIENASSTEFGPTAEPVVGLMTEWVKGNELEKRSTKGDLGGTMRLGAYK AALKKDTKIAEIYGTTDISERHRHRYEVNVDYKDRLEECGLVFSGMSPDGVLPETVEYPDHPWFIGVQYHPELKSRPLDP HPLFASFVEAAVEQSRLV >Mature_578_residues MFAFRLAPSQIRQQRIFETMKFGLAESEVKRYPVNPMARYVFITGGVVSSLGKGIAAAALGALLQSRGYRVRLRKLDPYL NVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTNEIKD FVTEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLPRGTAIYVHLTLMPYIPAAGELKTKPTQHSVKELQALGIHP DILLVRADREIPEAERRKLSLFCNVRPSAVIQALDVANIYDVPIAYHNEGLDSEVLAAFGIEPAPKPRLEQWEEVCNRIR TPEGEVTIAIVGKYTGLKDAYKSLIEALHHGGFANRVKVKLEWIESEVFEKEDPTPYLEKVNGILVPGGFGERGSEGKIM AAQFARERNVPYFGICFGMQMAVVEAARHLAGIENASSTEFGPTAEPVVGLMTEWVKGNELEKRSTKGDLGGTMRLGAYK AALKKDTKIAEIYGTTDISERHRHRYEVNVDYKDRLEECGLVFSGMSPDGVLPETVEYPDHPWFIGVQYHPELKSRPLDP HPLFASFVEAAVEQSRLV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=557, Percent_Identity=44.524236983842, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI28559085, Length=556, Percent_Identity=42.9856115107914, Blast_Score=454, Evalue=1e-127, Organism=Homo sapiens, GI28559083, Length=556, Percent_Identity=42.9856115107914, Blast_Score=454, Evalue=1e-127, Organism=Homo sapiens, GI221316689, Length=556, Percent_Identity=42.9856115107914, Blast_Score=454, Evalue=1e-127, Organism=Escherichia coli, GI1789142, Length=536, Percent_Identity=56.7164179104478, Blast_Score=601, Evalue=1e-173, Organism=Caenorhabditis elegans, GI25148299, Length=617, Percent_Identity=36.4667747163695, Blast_Score=393, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=40.3508771929825, Blast_Score=425, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6319432, Length=567, Percent_Identity=40.3880070546737, Blast_Score=424, Evalue=1e-119, Organism=Drosophila melanogaster, GI24664469, Length=565, Percent_Identity=44.070796460177, Blast_Score=449, Evalue=1e-126, Organism=Drosophila melanogaster, GI21357815, Length=511, Percent_Identity=43.2485322896282, Blast_Score=386, Evalue=1e-107,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 64299; Mature: 64299
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAFRLAPSQIRQQRIFETMKFGLAESEVKRYPVNPMARYVFITGGVVSSLGKGIAAAAL CCEEECCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHEEEEEEECHHHHHHCCHHHHHHH GALLQSRGYRVRLRKLDPYLNVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTGRSAT HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCC KTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTNEIKDFVTEGNDDYDFVICEIGGTV CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC GDIEAMPFMEAIRQLGNDLPRGTAIYVHLTLMPYIPAAGELKTKPTQHSVKELQALGIHP CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCC DILLVRADREIPEAERRKLSLFCNVRPSAVIQALDVANIYDVPIAYHNEGLDSEVLAAFG CEEEEECCCCCCHHHHCEEEEEEECCHHHHHHHHHHCCEEECCEEECCCCCCHHHHHHHC IEPAPKPRLEQWEEVCNRIRTPEGEVTIAIVGKYTGLKDAYKSLIEALHHGGFANRVKVK CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEE LEWIESEVFEKEDPTPYLEKVNGILVPGGFGERGSEGKIMAAQFARERNVPYFGICFGMQ EEEHHHHHHCCCCCCHHHHHCCCEEECCCCCCCCCCCCEEHHHHHHHCCCCEEEHHHHHH MAVVEAARHLAGIENASSTEFGPTAEPVVGLMTEWVKGNELEKRSTKGDLGGTMRLGAYK HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEHHHHH AALKKDTKIAEIYGTTDISERHRHRYEVNVDYKDRLEECGLVFSGMSPDGVLPETVEYPD HHHHCCCEEEEEECCCCHHHHHCCEEEEECCHHHHHHHCCEEEECCCCCCCCCCCCCCCC HPWFIGVQYHPELKSRPLDPHPLFASFVEAAVEQSRLV CCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFAFRLAPSQIRQQRIFETMKFGLAESEVKRYPVNPMARYVFITGGVVSSLGKGIAAAAL CCEEECCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHEEEEEEECHHHHHHCCHHHHHHH GALLQSRGYRVRLRKLDPYLNVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTGRSAT HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCC KTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTNEIKDFVTEGNDDYDFVICEIGGTV CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC GDIEAMPFMEAIRQLGNDLPRGTAIYVHLTLMPYIPAAGELKTKPTQHSVKELQALGIHP CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCC DILLVRADREIPEAERRKLSLFCNVRPSAVIQALDVANIYDVPIAYHNEGLDSEVLAAFG CEEEEECCCCCCHHHHCEEEEEEECCHHHHHHHHHHCCEEECCEEECCCCCCHHHHHHHC IEPAPKPRLEQWEEVCNRIRTPEGEVTIAIVGKYTGLKDAYKSLIEALHHGGFANRVKVK CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEE LEWIESEVFEKEDPTPYLEKVNGILVPGGFGERGSEGKIMAAQFARERNVPYFGICFGMQ EEEHHHHHHCCCCCCHHHHHCCCEEECCCCCCCCCCCCEEHHHHHHHCCCCEEEHHHHHH MAVVEAARHLAGIENASSTEFGPTAEPVVGLMTEWVKGNELEKRSTKGDLGGTMRLGAYK HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEHHHHH AALKKDTKIAEIYGTTDISERHRHRYEVNVDYKDRLEECGLVFSGMSPDGVLPETVEYPD HHHHCCCEEEEEECCCCHHHHHCCEEEEECCHHHHHHHCCEEEECCCCCCCCCCCCCCCC HPWFIGVQYHPELKSRPLDPHPLFASFVEAAVEQSRLV CCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]